RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ANTXRLA6NF34 631 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 KCNJ18B7U540 433 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 CAPN9O14815 690 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 MSI1O43347 362 aaKnown RBP18.2■□□□□ 0.5
SEC13-218ENST00000490283 EPN2O95208 641 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 TPM2P07951 284 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 SLC11A2P49281 568 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 PTK2Q05397 1052 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 KCNJ12Q14500 433 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 RSPO4Q2I0M5 234 aaPredicted RBP18.2■□□□□ 0.5
SEC13-218ENST00000490283 PLK5Q496M5 336 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 HSP90AA4PQ58FG1 418 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 EGFLAMQ63HQ2 1017 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 DENND1BQ6P3S1 775 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 TOGARAM2Q6ZUX3 1019 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 ANKS1BQ7Z6G8 1248 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 C12orf50Q8NA57 414 aaPredicted RBP18.2■□□□□ 0.5
SEC13-218ENST00000490283 SHC3Q92529 594 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 RMDN1Q96DB5 314 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 NOX5Q96PH1 765 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 SLC2A11Q9BYW1 496 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 ARRDC1-AS1Q9H2J1 176 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 SLC27A6Q9Y2P4 619 aa18.2■□□□□ 0.5
SEC13-218ENST00000490283 NPC1O15118 1278 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 MAP3K13O43283 966 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 ADAM23O75077 832 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 CISD3P0C7P0 127 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 EEF1GP26641 437 aaKnown RBP18.19■□□□□ 0.5
SEC13-218ENST00000490283 WASP42768 502 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 TBX4P57082 545 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 SNX16P57768 344 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 ARID5AQ03989 594 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 ADGRF1Q5T601 910 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 PRR23CQ6ZRP0 262 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 ERMP1Q7Z2K6 904 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 SCUBE3Q8IX30 993 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 FAM217AQ8IXS0 508 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 CLEC4CQ8WTT0 213 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 SERPINB11Q96P15 392 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 DDX50Q9BQ39 737 aaKnown RBP18.19■□□□□ 0.5
SEC13-218ENST00000490283 DUSP15Q9H1R2 295 aaPredicted RBP18.19■□□□□ 0.5
SEC13-218ENST00000490283 FBXO10Q9UK96 956 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 DNAJC12Q9UKB3 198 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 INVSQ9Y283 1065 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 CEP83Q9Y592 693 aa18.19■□□□□ 0.5
SEC13-218ENST00000490283 MYOFQ9NZM1 2061 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 TYW5A2RUC4 315 aaKnown RBP18.18■□□□□ 0.5
SEC13-218ENST00000490283 BECN2A8MW95 431 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 PRRT4C9JH25 899 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 GFRA2O00451 464 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 DCLK1O15075 740 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 GABBR2O75899 941 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 CHRM1P11229 460 aaPredicted RBP18.18■□□□□ 0.5
SEC13-218ENST00000490283 TGM1P22735 817 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 KRT9P35527 623 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 RPL34P49207 117 aaKnown RBP18.18■□□□□ 0.5
SEC13-218ENST00000490283 BPIFB4P59827 614 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 FOXK2Q01167 660 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 APBA1Q02410 837 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 RING1Q06587 406 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 STARD3Q14849 445 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 SASS6Q6UVJ0 657 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 TMA16Q96EY4 203 aaKnown RBP18.18■□□□□ 0.5
SEC13-218ENST00000490283 SLC4A5Q9BY07 1137 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 STOML2Q9UJZ1 356 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 NFE2L3Q9Y4A8 694 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.18■□□□□ 0.5
SEC13-218ENST00000490283 KIAA1549LQ6ZVL6 1849 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 CFAP54Q96N23 3096 aa18.18■□□□□ 0.5
SEC13-218ENST00000490283 E5RJQ4 531 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 TSPAN3O60637 253 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 MBD3O95983 291 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 HNRNPLP14866 589 aaKnown RBP eCLIP18.17■□□□□ 0.5
SEC13-218ENST00000490283 MPLP40238 635 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 CREB5Q02930 508 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 PDCLQ13371 301 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 NNTQ13423 1086 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 RAPGEF1Q13905 1077 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 EIF4HQ15056 248 aaKnown RBP18.17■□□□□ 0.5
SEC13-218ENST00000490283 AASDHQ4L235 1098 aaPredicted RBP18.17■□□□□ 0.5
SEC13-218ENST00000490283 TCP11X2Q5H9J9 407 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 BEND5Q7L4P6 421 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 DGLUCYQ7Z3D6 616 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 TMEM110Q86TL2 294 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 ZNF557Q8N988 423 aaPredicted RBP18.17■□□□□ 0.5
SEC13-218ENST00000490283 NETO1Q8TDF5 533 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 IRX2Q9BZI1 471 aaPredicted RBP18.17■□□□□ 0.5
SEC13-218ENST00000490283 CIPCQ9C0C6 399 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 PDCL3Q9H2J4 239 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 POPDC2Q9HBU9 364 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 ACP6Q9NPH0 428 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 SAMSN1Q9NSI8 373 aaKnown RBP18.17■□□□□ 0.5
SEC13-218ENST00000490283 ZNF292O60281 2723 aa18.17■□□□□ 0.5
SEC13-218ENST00000490283 IRAK2O43187 625 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 P2RY2P41231 377 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 MIIPQ5JXC2 388 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 PMS2CLQ68D20 193 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 LPCAT2Q7L5N7 544 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 PASD1Q8IV76 773 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 CCDC117Q8IWD4 279 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms