RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SARAFQ96BY9 339 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 REPS1Q96D71 796 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 MCRS1Q96EZ8 462 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 FAR2Q96K12 515 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 AGAP2Q99490 1192 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 FAM167BQ9BTA0 163 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 DDX23Q9BUQ8 820 aaKnown RBP4.5□□□□□ -1.69
CD46-216ENST00000490278 BRD8Q9H0E9 1235 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 VPS16Q9H269 839 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 SAYSD1Q9NPB0 183 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 SEMA4GQ9NTN9 838 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 SH3BP4Q9P0V3 963 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 LUZP4Q9P127 313 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 SRP68Q9UHB9 627 aaKnown RBP4.5□□□□□ -1.69
CD46-216ENST00000490278 ADAM21Q9UKJ8 722 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 FZD4Q9ULV1 537 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 DAPP1Q9UN19 280 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 PCDHB2Q9Y5E7 798 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 WNT6Q9Y6F9 365 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 DGKBQ9Y6T7 804 aa4.5□□□□□ -1.69
CD46-216ENST00000490278 CCDC187A0A096LP49 1063 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 HMX3A6NHT5 357 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 TARM1B6A8C7 271 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 KIF28PB7ZC32 967 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 H7C1Q1 480 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 M0QZQ0 153 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 IRAK2O43187 625 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 AKAP8O43823 692 aaKnown RBP4.49□□□□□ -1.69
CD46-216ENST00000490278 PRAMEF2O60811 474 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 LARGE1O95461 756 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 MT-CO3P00414 261 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 APEHP13798 732 aaKnown RBP4.49□□□□□ -1.69
CD46-216ENST00000490278 MATN1P21941 496 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 GALNSP34059 522 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 CCT5P48643 541 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 JAK3P52333 1124 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 ARL4CP56559 192 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 BIRC3Q13489 604 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 CBFBQ13951 182 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 RPS6KA2Q15349 733 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 FAM187BQ17R55 369 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 TMEM95Q3KNT9 176 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 ZNF569Q5MCW4 686 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 ACSM6Q6P461 480 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 RINLQ6ZS11 566 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 ARHGEF25Q86VW2 580 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 ZNF354CQ86Y25 554 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 CPXCR1Q8N123 301 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 OR52L2PQ8NGH6 319 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 MAFAQ8NHW3 353 aaPredicted RBP4.49□□□□□ -1.69
CD46-216ENST00000490278 HMGB4Q8WW32 186 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 NPIPB3Q92617 1050 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 REXO5Q96IC2 774 aaKnown RBP4.49□□□□□ -1.69
CD46-216ENST00000490278 HS6ST2Q96MM7 605 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 SORCS2Q96PQ0 1159 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 CCDC134Q9H6E4 229 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 ELAC1Q9H777 363 aaKnown RBP4.49□□□□□ -1.69
CD46-216ENST00000490278 KCNK9Q9NPC2 374 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 GAR1Q9NY12 217 aaKnown RBP4.49□□□□□ -1.69
CD46-216ENST00000490278 ASIC5Q9NY37 505 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 KIF17Q9P2E2 1029 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 VPS4AQ9UN37 437 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 C19orf53Q9UNZ5 99 aaPredicted RBP4.49□□□□□ -1.69
CD46-216ENST00000490278 GPR52Q9Y2T5 361 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 PCDHB7Q9Y5E2 793 aa4.49□□□□□ -1.69
CD46-216ENST00000490278 LOC105369274A0A096LPK9 316 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 LOC102723532A0A0G2JNH3 316 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 BTBD19C9JJ37 291 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 H3BNC9 293 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 CREB3O43889 395 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 FAM155BO75949 473 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 C1RP00736 705 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 MBPP02686 304 aaPredicted RBP4.48□□□□□ -1.69
CD46-216ENST00000490278 HSD3B1P14060 373 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 DUSP1P28562 367 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 THBS4P35443 961 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 CLK3P49761 638 aaKnown RBP4.48□□□□□ -1.69
CD46-216ENST00000490278 CDK7P50613 346 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 RAE1P78406 368 aaKnown RBP4.48□□□□□ -1.69
CD46-216ENST00000490278 SF3A3Q12874 501 aaKnown RBP eCLIP4.48□□□□□ -1.692e-12■■■□□ 18.6
CD46-216ENST00000490278 PPFIA1Q13136 1202 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 MFSD13AQ14CX5 517 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 TAF5Q15542 800 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 AAK1Q2M2I8 961 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 C4orf46Q504U0 113 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 TTC22Q5TAA0 569 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 ANKRD40Q6AI12 368 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 C16orf89Q6UX73 402 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 SERPINA13PQ6UXR4 307 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 SMAP1Q8IYB5 467 aaPredicted RBP4.48□□□□□ -1.69
CD46-216ENST00000490278 OR4N4Q8N0Y3 316 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 GLMPQ8WWB7 406 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 PPM1EQ8WY54 764 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 CPT1BQ92523 772 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 C3orf49Q96BT1 292 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 KAZALD1Q96I82 304 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 CCDC17Q96LX7 622 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 TRAPPC9Q96Q05 1148 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 FYTTD1Q96QD9 318 aaKnown RBP4.48□□□□□ -1.69
CD46-216ENST00000490278 ADGRE3Q9BY15 652 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms