RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 TPGS1Q6ZTW0 290 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 IRF2BP1Q8IU81 584 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 ZNF513Q8N8E2 541 aaPredicted RBP10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 UBA3Q8TBC4 463 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 STK32AQ8WU08 396 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 IRGQQ8WZA9 623 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 PLD4Q96BZ4 506 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 PIWIL1Q96J94 861 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 HSFY1Q96LI6 401 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 ACOX2Q99424 681 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 SRRTQ9BXP5 876 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 SLC2A11Q9BYW1 496 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 IRX2Q9BZI1 471 aaPredicted RBP10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 LRRC4Q9HBW1 653 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 OLA1Q9NTK5 396 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 DNAJC17Q9NVM6 304 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 KIAA1468Q9P260 1216 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 HESX1Q9UBX0 185 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 MBD1Q9UIS9 605 aaPredicted RBP10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 INVSQ9Y283 1065 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 ACACBO00763 2458 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 PLXND1Q9Y4D7 1925 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 BIN1O00499 593 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 NPC1O15118 1278 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 CAVIN2O95810 425 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 LATS1O95835 1130 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 FYNP06241 537 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 CD19P15391 556 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 CORO1AP31146 461 aaKnown RBP10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 DGKGP49619 791 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 ADIGQ0VDE8 80 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 CETN1Q12798 172 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 BYSLQ13895 437 aaKnown RBP10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 CCDC6Q16204 474 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 CCDC40Q4G0X9 1142 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 PEAR1Q5VY43 1037 aaPredicted RBP10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 BEND5Q7L4P6 421 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 KIAA0907Q7Z7F0 614 aaPredicted RBP10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 METTL3Q86U44 580 aaKnown RBP10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 DENND1CQ8IV53 801 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 ARHGEF19Q8IW93 802 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 PPM1KQ8N3J5 372 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 FRMD1Q8N878 549 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 AZIN2Q96A70 460 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 TPSD1Q9BZJ3 242 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 ZDHHC4Q9NPG8 344 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 ABCC13Q9NSE7 274 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 CHMP5Q9NZZ3 219 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 RWDD2AQ9UIY3 292 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 RASAL2Q9UJF2 1139 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 STRIP2Q9ULQ0 834 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 CLEC4EQ9ULY5 219 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 CTNND2Q9UQB3 1225 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 PCDHB4Q9Y5E5 795 aa10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.17□□□□□ -0.78
TMEM39A-210ENST00000490099 NUP205Q92621 2012 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 THADAQ6YHU6 1953 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 SLC12A8A0AV02 714 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 TIMM44O43615 452 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 FGFR1OPO95684 399 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 AFPP02771 609 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 GPD2P43304 727 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 STX17P56962 302 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 ZNF445P59923 1031 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 GEN1Q17RS7 908 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 ADGRF1Q5T601 910 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 STPG1Q5TH74 334 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 TMEM215Q68D42 235 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 KIAA1211LQ6NV74 962 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 CLEC17AQ6ZS10 378 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 RRAGAQ7L523 313 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 C12orf50Q8NA57 414 aaPredicted RBP10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 IPO4Q8TEX9 1081 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 RLN3Q8WXF3 142 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 DDX1Q92499 740 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 LSM14BQ9BX40 385 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 SLC4A5Q9BY07 1137 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 INTS2Q9H0H0 1204 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 PLK2Q9NYY3 685 aa10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 THAP10Q9P2Z0 257 aaPredicted RBP10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 EVLQ9UI08 416 aaPredicted RBP10.16□□□□□ -0.78
TMEM39A-210ENST00000490099 PI4KAP42356 2102 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 TCRBV21S2A2A0A5A6 115 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 LNP1A1A4G5 178 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 GTPBP10A4D1E9 387 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 CDX4O14627 284 aaPredicted RBP10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 FBXO21O94952 628 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 ADRB1P08588 477 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 HOXB2P14652 356 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 BRD2P25440 801 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 HOXD9P28356 352 aaPredicted RBP10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 GBP1P32455 592 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 HOXD12P35452 270 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 PTGER3P43115 390 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 CREB5Q02930 508 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 RING1Q06587 406 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 EIF4EBP2Q13542 120 aaPredicted RBP10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 EIF4HQ15056 248 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 MPP7Q5T2T1 576 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 TCEAL6Q6IPX3 200 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms