RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 PDE5AO76074 875 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 HOXA11P31270 313 aaPredicted RBP13.73□□□□□ -0.21
TNXB-206ENST00000490077 L1CAMP32004 1257 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 ATXN3P54252 364 aaPredicted RBP13.73□□□□□ -0.21
TNXB-206ENST00000490077 SLC18A2Q05940 514 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 ARHGAP1Q07960 439 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 PPP2R5DQ14738 602 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 SYPL2Q5VXT5 272 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 PLD6Q8N2A8 252 aaKnown RBP13.73□□□□□ -0.21
TNXB-206ENST00000490077 SPATA6LQ8N4H0 392 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 TBCBQ99426 244 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 PLLPQ9Y342 182 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 IKBKGQ9Y6K9 419 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 SMAPO00193 183 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 SMNDC1O75940 238 aaKnown RBP eCLIP13.73□□□□□ -0.21
TNXB-206ENST00000490077 ALDOAP04075 364 aaKnown RBP13.73□□□□□ -0.21
TNXB-206ENST00000490077 ALDH3A1P30838 453 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 PCK1P35558 622 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 CDK16Q00536 496 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 GRAMD1AQ96CP6 724 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 FAM161BQ96MY7 647 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 AGAP2Q99490 1192 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 OSMRQ99650 979 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 THTPAQ9BU02 230 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 NRDE2Q9H7Z3 1164 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 DTLQ9NZJ0 730 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 HESX1Q9UBX0 185 aa13.73□□□□□ -0.21
TNXB-206ENST00000490077 BARX2Q9UMQ3 279 aaPredicted RBP13.73□□□□□ -0.21
TNXB-206ENST00000490077 DCTN3O75935 186 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 TPH1P17752 444 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 MGAT1P26572 445 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 PHBP35232 272 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 GABRB2P47870 512 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 USP4Q13107 963 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 ITGA7Q13683 1181 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 SNX30Q5VWJ9 437 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 STKLD1Q8NE28 680 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 CCDC124Q96CT7 223 aaKnown RBP13.72□□□□□ -0.21
TNXB-206ENST00000490077 BTBD10Q9BSF8 475 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 RSAD1Q9HA92 442 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 KRT82Q9NSB4 513 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 ASNSD1Q9NWL6 643 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 PPM1HQ9ULR3 514 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 AK5Q9Y6K8 562 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 CREB3O43889 395 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 MFSD11O43934 449 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 STK10O94804 968 aaKnown RBP13.72□□□□□ -0.21
TNXB-206ENST00000490077 IRF9Q00978 393 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 TEX44Q53QW1 395 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 THEMIS2Q5TEJ8 643 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 FOXB2Q5VYV0 432 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 ARMCX2Q7L311 632 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 NSL1Q96IY1 281 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 FCRL3Q96P31 734 aaPredicted RBP13.72□□□□□ -0.21
TNXB-206ENST00000490077 TTC1Q99614 292 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 DOCK3Q8IZD9 2030 aa13.72□□□□□ -0.21
TNXB-206ENST00000490077 APOL1O14791 398 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 UBTFL6P0CB48 400 aaPredicted RBP13.71□□□□□ -0.21
TNXB-206ENST00000490077 ESRRAP11474 423 aaPredicted RBP13.71□□□□□ -0.21
TNXB-206ENST00000490077 OSBPP22059 807 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 PARP6Q2NL67 630 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 KLHL38Q2WGJ6 581 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 SLC26A11Q86WA9 606 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 ARRDC4Q8NCT1 418 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 GSTCDQ8NEC7 633 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 SLC2A14Q8TDB8 520 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 SLC35F5Q8WV83 523 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 SCG3Q8WXD2 468 aaKnown RBP13.71□□□□□ -0.21
TNXB-206ENST00000490077 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNXB-206ENST00000490077 PANX3Q96QZ0 392 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 VPS11Q9H270 941 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 CYP4F11Q9HBI6 524 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 TROVE2P10155 538 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNXB-206ENST00000490077 CACNA2D1P54289 1103 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 NME3Q13232 169 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 SH3D19Q5HYK7 790 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 FYB2Q5VWT5 728 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 TAPT1Q6NXT6 567 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 NUDCD3Q8IVD9 361 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 VPS52Q8N1B4 723 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 PHTF2Q8N3S3 785 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 SNX31Q8N9S9 440 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 CCHCR1Q8TD31 782 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 PYDC1Q8WXC3 89 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 NT5C1AQ9BXI3 368 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 ZNF408Q9H9D4 720 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 DONSONQ9NYP3 566 aa13.71□□□□□ -0.21
TNXB-206ENST00000490077 MTF2Q9Y483 593 aaPredicted RBP13.71□□□□□ -0.21
TNXB-206ENST00000490077 TRIP12Q14669 1992 aaPredicted RBP13.71□□□□□ -0.21
TNXB-206ENST00000490077 I3L4J1 428 aa13.71□□□□□ -0.22
TNXB-206ENST00000490077 TPP1O14773 563 aa13.71□□□□□ -0.22
TNXB-206ENST00000490077 ZCCHC18P0CG32 403 aa13.71□□□□□ -0.22
TNXB-206ENST00000490077 SAT1P21673 171 aa13.71□□□□□ -0.22
TNXB-206ENST00000490077 PDE1BQ01064 536 aa13.71□□□□□ -0.22
TNXB-206ENST00000490077 PKDCCQ504Y2 493 aa13.71□□□□□ -0.22
TNXB-206ENST00000490077 LCLAT1Q6UWP7 414 aa13.71□□□□□ -0.22
TNXB-206ENST00000490077 KDELC2Q7Z4H8 507 aa13.71□□□□□ -0.22
TNXB-206ENST00000490077 MAB21L3Q8N8X9 362 aa13.71□□□□□ -0.22
TNXB-206ENST00000490077 FNIP1Q8TF40 1166 aa13.71□□□□□ -0.22
TNXB-206ENST00000490077 ARNTL2Q8WYA1 636 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms