RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 MAGEA1P43355 309 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 KPNA1P52294 538 aaPredicted RBP17.42■□□□□ 0.38
SFXN5-220ENST00000490056 DEUP1Q05D60 604 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 TNK2Q07912 1038 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 EIF4EBP2Q13542 120 aaPredicted RBP17.42■□□□□ 0.38
SFXN5-220ENST00000490056 CDO1Q16878 200 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 ARHGAP29Q52LW3 1261 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 Q6ZNB5 142 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 DENND1CQ8IV53 801 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 TTC8Q8TAM2 541 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 OSCP1Q8WVF1 389 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 SLC39A13Q96H72 371 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 EIF3CQ99613 913 aaKnown RBP17.42■□□□□ 0.38
SFXN5-220ENST00000490056 FAM83CQ9BQN1 747 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 NUP85Q9BW27 656 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 PIGVQ9NUD9 493 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 RRN3Q9NYV6 651 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 LSM7Q9UK45 103 aaKnown RBP17.42■□□□□ 0.38
SFXN5-220ENST00000490056 AGO1Q9UL18 857 aaKnown RBP17.42■□□□□ 0.38
SFXN5-220ENST00000490056 TLR6Q9Y2C9 796 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 SCINQ9Y6U3 715 aa17.42■□□□□ 0.38
SFXN5-220ENST00000490056 KIF26AQ9ULI4 1882 aaPredicted RBP17.41■□□□□ 0.38
SFXN5-220ENST00000490056 TMEM253P0C7T8 217 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 SRFP11831 508 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 SDC4P31431 198 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 PTPN9P43378 593 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 IFNAR2P48551 515 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 RING1Q06587 406 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 NNTQ13423 1086 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 EML3Q32P44 896 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 IER5LQ5T953 404 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 LRRC8AQ8IWT6 810 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 ACRBPQ8NEB7 543 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 CTNNBL1Q8WYA6 563 aaPredicted RBP17.41■□□□□ 0.38
SFXN5-220ENST00000490056 RNF34Q969K3 372 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 PDLIM2Q96JY6 352 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 DCLK3Q9C098 648 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 EBF3Q9H4W6 596 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 MRPL47Q9HD33 250 aaKnown RBP17.41■□□□□ 0.38
SFXN5-220ENST00000490056 HPS4Q9NQG7 708 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 TFR2Q9UP52 801 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 REXO2Q9Y3B8 237 aaKnown RBP17.41■□□□□ 0.38
SFXN5-220ENST00000490056 PCDHA13Q9Y5I0 950 aa17.41■□□□□ 0.38
SFXN5-220ENST00000490056 ARNTLO00327 626 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 CCP110O43303 1012 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 MOCS2O96007 188 aaPredicted RBP17.4■□□□□ 0.38
SFXN5-220ENST00000490056 HARS2P49590 506 aaKnown RBP17.4■□□□□ 0.38
SFXN5-220ENST00000490056 ZNF143P52747 638 aaPredicted RBP17.4■□□□□ 0.38
SFXN5-220ENST00000490056 ZNF252P-AS1Q0IIN9 211 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 SPA17Q15506 151 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 C10orf76Q5T2E6 689 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 BNIPLQ7Z465 357 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 ADGRG2Q8IZP9 1017 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 PGAP3Q96FM1 320 aaPredicted RBP17.4■□□□□ 0.38
SFXN5-220ENST00000490056 BTBD6Q96KE9 485 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 GTSE1Q9NYZ3 720 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 CTTNBP2NLQ9P2B4 639 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 TBC1D14Q9P2M4 693 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 XPO7Q9UIA9 1087 aaKnown RBP17.4■□□□□ 0.38
SFXN5-220ENST00000490056 DUSP12Q9UNI6 340 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 NCOR1O75376 2440 aa17.4■□□□□ 0.38
SFXN5-220ENST00000490056 GOLGA6L7A0A1B0GV03 622 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 OTOL1A6NHN0 477 aaPredicted RBP17.39■□□□□ 0.37
SFXN5-220ENST00000490056 TRDMT1O14717 391 aaKnown RBP17.39■□□□□ 0.37
SFXN5-220ENST00000490056 SLC9A3R1O14745 358 aaPredicted RBP17.39■□□□□ 0.37
SFXN5-220ENST00000490056 ENDOD1O94919 500 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 PSMA2P25787 234 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 CXCR3P49682 368 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 VCPP55072 806 aaKnown RBP17.39■□□□□ 0.37
SFXN5-220ENST00000490056 PDGFRLQ15198 375 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 NUGGCQ68CJ6 796 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 FAM131BQ86XD5 332 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 UNC45BQ8IWX7 931 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 KIAA1958Q8N8K9 716 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 FAM172AQ8WUF8 416 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 CENPIQ92674 756 aaPredicted RBP17.39■□□□□ 0.37
SFXN5-220ENST00000490056 IRF7Q92985 503 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 DESI2Q9BSY9 194 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 CNPY3Q9BT09 278 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 ANLNQ9NQW6 1124 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 SLC2A4RGQ9NR83 387 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 TMPRSS4Q9NRS4 437 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.39■□□□□ 0.37
SFXN5-220ENST00000490056 TICRRQ7Z2Z1 1910 aa17.39■□□□□ 0.37
SFXN5-220ENST00000490056 MYOFQ9NZM1 2061 aa17.38■□□□□ 0.37
SFXN5-220ENST00000490056 TTC28Q96AY4 2481 aa17.38■□□□□ 0.37
SFXN5-220ENST00000490056 RCCD1A6NED2 376 aa17.38■□□□□ 0.37
SFXN5-220ENST00000490056 KCNU1A8MYU2 1149 aa17.38■□□□□ 0.37
SFXN5-220ENST00000490056 ACSL4O60488 711 aa17.38■□□□□ 0.37
SFXN5-220ENST00000490056 F9P00740 461 aa17.38■□□□□ 0.37
SFXN5-220ENST00000490056 APOEP02649 317 aa17.38■□□□□ 0.37
SFXN5-220ENST00000490056 PTMAP06454 111 aaKnown RBP17.38■□□□□ 0.37
SFXN5-220ENST00000490056 CCR1P32246 355 aa17.38■□□□□ 0.37
SFXN5-220ENST00000490056 RDXP35241 583 aaKnown RBP17.38■□□□□ 0.37
SFXN5-220ENST00000490056 HDAC4P56524 1084 aa17.38■□□□□ 0.37
SFXN5-220ENST00000490056 CCZ1BP86790 482 aa17.38■□□□□ 0.37
SFXN5-220ENST00000490056 CCZ1P86791 482 aaPredicted RBP17.38■□□□□ 0.37
SFXN5-220ENST00000490056 RUNX3Q13761 415 aa17.38■□□□□ 0.37
SFXN5-220ENST00000490056 NADSYN1Q6IA69 706 aa17.38■□□□□ 0.37
SFXN5-220ENST00000490056 RHBDF2Q6PJF5 856 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms