RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 NUDCD3Q8IVD9 361 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 RILPQ96NA2 401 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 RAB3IPQ96QF0 476 aaPredicted RBP16.24■□□□□ 0.19
BRD9-208ENST00000489816 NFKBIZQ9BYH8 718 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 SNX25Q9H3E2 840 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 HTTP42858 3142 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 KPNA7A9QM74 516 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 GOLGA8TH3BQL2 631 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 RFPL1O75677 317 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 MLH1P40692 756 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 SULT1E1P49888 294 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 NEK3P51956 506 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 NBPF20Q3BBV1 942 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 SH2D5Q6ZV89 423 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 SPNS2Q8IVW8 549 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 BEST2Q8NFU1 509 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 AGR3Q8TD06 166 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 SIGLEC10Q96LC7 697 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 CADM1Q9BY67 442 aaKnown RBP16.24■□□□□ 0.19
BRD9-208ENST00000489816 SMIM28A0A1B0GU29 152 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 GYG2O15488 501 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 TREHO43280 583 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 MFSD11O43934 449 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 C1QAP02745 245 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 MGAT1P26572 445 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 ALDH18A1P54886 795 aaKnown RBP16.24■□□□□ 0.19
BRD9-208ENST00000489816 CTC1Q2NKJ3 1217 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 KHDC1Q4VXA5 237 aaKnown RBP16.24■□□□□ 0.19
BRD9-208ENST00000489816 PAN2Q504Q3 1202 aaKnown RBP16.24■□□□□ 0.19
BRD9-208ENST00000489816 SLC45A4Q5BKX6 768 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 SLC9A4Q6AI14 798 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 SLC27A1Q6PCB7 646 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 RINLQ6ZS11 566 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 PPP1R14CQ8TAE6 165 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 KBTBD7Q8WVZ9 684 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 CLPTM1LQ96KA5 538 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 FRMD8P1Q9BZ68 369 aaPredicted RBP16.24■□□□□ 0.19
BRD9-208ENST00000489816 ZNF358Q9NW07 568 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 UBP1Q9NZI7 540 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 SNX10Q9Y5X0 201 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 BPTFQ12830 3046 aa16.24■□□□□ 0.19
BRD9-208ENST00000489816 DLDP09622 509 aaKnown RBP16.23■□□□□ 0.19
BRD9-208ENST00000489816 SLC18A1P54219 525 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 PRKD1Q15139 912 aaPredicted RBP16.23■□□□□ 0.19
BRD9-208ENST00000489816 ARRDC4Q8NCT1 418 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 NPLOC4Q8TAT6 608 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 AZIN2Q96A70 460 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 EBF4Q9BQW3 602 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 GCOM2Q9BZD3 368 aaPredicted RBP16.23■□□□□ 0.19
BRD9-208ENST00000489816 EBF2Q9HAK2 575 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.23■□□□□ 0.19
BRD9-208ENST00000489816 TRIP12Q14669 1992 aaPredicted RBP16.23■□□□□ 0.19
BRD9-208ENST00000489816 FCHO1O14526 889 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 PEX11AO75192 247 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 AMHP03971 560 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 ERVK-10P10266 1014 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 RPL10AP62906 217 aaKnown RBP16.23■□□□□ 0.19
BRD9-208ENST00000489816 COLGALT1Q8NBJ5 622 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 SNX27Q96L92 541 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 SLC5A4Q9NY91 659 aa16.23■□□□□ 0.19
BRD9-208ENST00000489816 M0QYT0 321 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 ESRRAP11474 423 aaPredicted RBP16.22■□□□□ 0.19
BRD9-208ENST00000489816 ALADP13716 330 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 AQP5P55064 265 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 CCDC15Q0P6D6 951 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 IFRD2Q12894 506 aaPredicted RBP16.22■□□□□ 0.19
BRD9-208ENST00000489816 DGKDQ16760 1214 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 NCBP2-AS2Q69YL0 99 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 GPR142Q7Z601 462 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 MCUR1Q96AQ8 359 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 E2F7Q96AV8 911 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 ALKBH8Q96BT7 664 aaKnown RBP16.22■□□□□ 0.19
BRD9-208ENST00000489816 RSRC1Q96IZ7 334 aaKnown RBP16.22■□□□□ 0.19
BRD9-208ENST00000489816 PLLPQ9Y342 182 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 FAM72CH0Y354 149 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 H3BRJ5 948 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 SAT1P21673 171 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 TGM2P21980 687 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 PSMB4P28070 264 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 MAP3K7CLP57077 242 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 FAM72AQ5TYM5 149 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 FAM72DQ6L9T8 149 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 FAM72BQ86X60 149 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 MAGEC3Q8TD91 643 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 PGBD4Q96DM1 585 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 KCNK16Q96T55 309 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 MED10Q9BTT4 135 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 OTOFQ9HC10 1997 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 I3L4J1 428 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 PDHA1P08559 390 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 SMIM10L2AP0DMW4 78 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 SMIM10L2BP0DMW5 78 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.194e-6■□□□□ 8.3
BRD9-208ENST00000489816 ARL4AP40617 200 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 CCNA1P78396 465 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 SLC18A2Q05940 514 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 KPNB1Q14974 876 aaKnown RBP16.22■□□□□ 0.19
BRD9-208ENST00000489816 RASA2Q15283 850 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 TAF11Q15544 211 aa16.22■□□□□ 0.19
BRD9-208ENST00000489816 WSCD1Q658N2 575 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms