RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 ZSCAN18Q8TBC5 510 aaPredicted RBP11.35□□□□□ -0.59
TFF3-203ENST00000489676 WBP2Q969T9 261 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 RSPRY1Q96DX4 576 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 CALR3Q96L12 384 aaKnown RBP11.35□□□□□ -0.59
TFF3-203ENST00000489676 SMG9Q9H0W8 520 aaKnown RBP11.35□□□□□ -0.59
TFF3-203ENST00000489676 GOLPH3Q9H4A6 298 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 SLITRK6Q9H5Y7 841 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 FAM204AQ9H8W3 233 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 LZTFL1Q9NQ48 299 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 ANLNQ9NQW6 1124 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.35□□□□□ -0.59
TFF3-203ENST00000489676 CCL26Q9Y258 94 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 PAXBP1Q9Y5B6 917 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 CPQQ9Y646 472 aa11.35□□□□□ -0.59
TFF3-203ENST00000489676 SLC12A8A0AV02 714 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 STC2O76061 302 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 MBL2P11226 248 aaPredicted RBP11.34□□□□□ -0.59
TFF3-203ENST00000489676 LAMP2P13473 410 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 IL1R2P27930 398 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 PCK1P35558 622 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 DEKP35659 375 aaKnown RBP11.34□□□□□ -0.59
TFF3-203ENST00000489676 AVPR1AP37288 418 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 NOP2P46087 812 aaKnown RBP11.34□□□□□ -0.59
TFF3-203ENST00000489676 KCNQ1P51787 676 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 TFF2Q03403 129 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 DEUP1Q05D60 604 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 SCAPQ12770 1279 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 NME3Q13232 169 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 PPP2R5DQ14738 602 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 CDO1Q16878 200 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 FAM78AQ5JUQ0 283 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 ARTNQ5T4W7 220 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 Q6ZNB5 142 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 FAM131BQ86XD5 332 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 ARID3BQ8IVW6 561 aaPredicted RBP11.34□□□□□ -0.59
TFF3-203ENST00000489676 C17orf53Q8N3J3 647 aaPredicted RBP11.34□□□□□ -0.59
TFF3-203ENST00000489676 SMARCD2Q92925 531 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 CD101Q93033 1021 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 NTAN1Q96AB6 310 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 PLD4Q96BZ4 506 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 TRIM44Q96DX7 344 aaPredicted RBP11.34□□□□□ -0.59
TFF3-203ENST00000489676 PEBP4Q96S96 227 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 NACA2Q9H009 215 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 KIF9Q9HAQ2 790 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 TDP1Q9NUW8 608 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 SMPD4Q9NXE4 827 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 TRMT1Q9NXH9 659 aaKnown RBP11.34□□□□□ -0.59
TFF3-203ENST00000489676 ARHGEF38Q9NXL2 777 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 EPS15L1Q9UBC2 864 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 GUCA1BQ9UMX6 200 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 USTQ9Y2C2 406 aa11.34□□□□□ -0.59
TFF3-203ENST00000489676 ZFP37Q9Y6Q3 630 aaPredicted RBP11.34□□□□□ -0.59
TFF3-203ENST00000489676 TRIOO75962 3097 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 COL4A2P08572 1712 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 KCNU1A8MYU2 1149 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 F9P00740 461 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 KLKB1P03952 638 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 MIPP30301 263 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 KPNA1P52294 538 aaPredicted RBP11.33□□□□□ -0.6
TFF3-203ENST00000489676 TBX4P57082 545 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 TAS2R40P59535 323 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 COG7P83436 770 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 MESDQ14696 234 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 IFI16Q16666 785 aaKnown RBP11.33□□□□□ -0.6
TFF3-203ENST00000489676 ZC3H12AQ5D1E8 599 aaKnown RBP11.33□□□□□ -0.6
TFF3-203ENST00000489676 BRMS1LQ5PSV4 323 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 TXNRD3NBQ6F5E7 133 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 PTCRAQ6ISU1 281 aaPredicted RBP11.33□□□□□ -0.6
TFF3-203ENST00000489676 OTOP3Q7RTS5 596 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 DDX42Q86XP3 938 aaKnown RBP eCLIP11.33□□□□□ -0.6
TFF3-203ENST00000489676 CCDC185Q8N715 623 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 SH3RF2Q8TEC5 729 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 LRRC3BQ96PB8 259 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 PHF7Q9BWX1 381 aaPredicted RBP11.33□□□□□ -0.6
TFF3-203ENST00000489676 IRX2Q9BZI1 471 aaPredicted RBP11.33□□□□□ -0.6
TFF3-203ENST00000489676 GKN1Q9NS71 199 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 TMEM51Q9NW97 253 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 OBP2AQ9NY56 170 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 THEGQ9P2T0 379 aa11.33□□□□□ -0.6
TFF3-203ENST00000489676 SYNJ2BP-COX16A0A087WUM0 186 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 GOLGA6L9A6NEM1 432 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 TMEM110-MUSTN1A8MSY1 372 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 C2CD4DB7Z1M9 353 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 ANHXE9PGG2 379 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 LEFTY2O00292 366 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 GFRA2O00451 464 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 PALMO75781 387 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 RNF8O76064 485 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 LATS1O95835 1130 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 HMBSP08397 361 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 IRF1P10914 325 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 IL9P15248 144 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 COMTP21964 271 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 CCR1P32246 355 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 GBP1P32455 592 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 GBP2P32456 591 aaPredicted RBP11.32□□□□□ -0.6
TFF3-203ENST00000489676 SLC1A1P43005 524 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 HTR4Q13639 388 aa11.32□□□□□ -0.6
TFF3-203ENST00000489676 PUS10Q3MIT2 529 aaKnown RBP11.32□□□□□ -0.6
TFF3-203ENST00000489676 NUGGCQ68CJ6 796 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms