RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 C16orf72Q14CZ0 275 aa10.17□□□□□ -0.78
NOD1-208ENST00000489614 RPS6KA1Q15418 735 aa10.17□□□□□ -0.78
NOD1-208ENST00000489614 CCDC153Q494R4 210 aa10.17□□□□□ -0.78
NOD1-208ENST00000489614 ZNF598Q86UK7 904 aaKnown RBP10.17□□□□□ -0.78
NOD1-208ENST00000489614 ARHGAP24Q8N264 748 aa10.17□□□□□ -0.78
NOD1-208ENST00000489614 MCUR1Q96AQ8 359 aa10.17□□□□□ -0.78
NOD1-208ENST00000489614 PCDHB18PQ96TA0 734 aa10.17□□□□□ -0.78
NOD1-208ENST00000489614 MIPEPQ99797 713 aa10.17□□□□□ -0.78
NOD1-208ENST00000489614 PI4K2AQ9BTU6 479 aa10.17□□□□□ -0.78
NOD1-208ENST00000489614 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.17□□□□□ -0.78
NOD1-208ENST00000489614 SDCBP2Q9H190 292 aa10.17□□□□□ -0.78
NOD1-208ENST00000489614 TRMT13Q9NUP7 481 aaKnown RBP10.17□□□□□ -0.78
NOD1-208ENST00000489614 GRID2IPA4D2P6 1211 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 PIRO00625 290 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 MTA2O94776 668 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 UNGP13051 313 aaPredicted RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 CDH5P33151 784 aaPredicted RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 C1QTNF8P60827 252 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 NOP14P78316 857 aaKnown RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 LONRF1Q17RB8 773 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 TAF1BQ53T94 588 aaPredicted RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 C6orf118Q5T5N4 469 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 SPOPLQ6IQ16 392 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 TAOK1Q7L7X3 1001 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 CCDC25Q86WR0 208 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 VPS52Q8N1B4 723 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 LINC01599Q8WXQ3 324 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 ZSWIM1Q9BR11 485 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 NXF3Q9H4D5 531 aaKnown RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 SNX24Q9Y343 169 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 HBS1LQ9Y450 684 aaKnown RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 IPPQ9Y573 584 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 NME7Q9Y5B8 376 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 GPC6Q9Y625 555 aaPredicted RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 PTGESO14684 152 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 ATP5HO75947 161 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 AGTP01019 485 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 TBXAS1P24557 533 aaPredicted RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 LRPAP1P30533 357 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 MYL6P60660 151 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 KLHL30Q0D2K2 578 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 FAM209AQ5JX71 171 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 RNF43Q68DV7 783 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 NEPROQ6NW34 567 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 ANKRD33Q7Z3H0 272 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 SCAIQ8N9R8 606 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 SLC20A1Q8WUM9 679 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 SPOCK2Q92563 424 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 ACAP3Q96P50 834 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 AGPAT1Q99943 283 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 CADM1Q9BY67 442 aaKnown RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 EPB41L4BQ9H329 900 aa10.16□□□□□ -0.78
NOD1-208ENST00000489614 PABPC3Q9H361 631 aaKnown RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 LIN28AQ9H9Z2 209 aaKnown RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 MKI67P46013 3256 aaKnown RBP10.16□□□□□ -0.78
NOD1-208ENST00000489614 SGPL1O95470 568 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 CKBP12277 381 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 PIK3CAP42336 1068 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 STT3AP46977 705 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 FAM189BP81408 668 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 PTP4A2Q12974 167 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 MPP2Q14168 576 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 CTC1Q2NKJ3 1217 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 SLFN11Q7Z7L1 901 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 ZNF677Q86XU0 584 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 THNSL1Q8IYQ7 743 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 ZBED8Q8IZ13 594 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 RNF169Q8NCN4 708 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 INPP5DQ92835 1189 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 ECSITQ9BQ95 431 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 SNTG2Q9NY99 539 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 DKK3Q9UBP4 350 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 MOSPD1Q9UJG1 213 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 ST3GAL5Q9UNP4 418 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 ATG2AQ2TAZ0 1938 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 CYP11B1P15538 503 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 TNNI1P19237 187 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 S100A1P23297 94 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 TTC3P53804 2025 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 DNAJC3Q13217 504 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 ANKDD1AQ495B1 522 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 MEI1Q5TIA1 1274 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 CATSPER4Q7RTX7 472 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 SLC47A2Q86VL8 602 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 ANKK1Q8NFD2 765 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 BHMTQ93088 406 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 ELMO3Q96BJ8 720 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 SLC39A3Q9BRY0 314 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 PACSIN1Q9BY11 444 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 SLCO1B3Q9NPD5 702 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 RNF19AQ9NV58 838 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 TBK1Q9UHD2 729 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 TET1Q8NFU7 2136 aa10.15□□□□□ -0.78
NOD1-208ENST00000489614 SMIM31A0A1B0GVY4 71 aa10.15□□□□□ -0.79
NOD1-208ENST00000489614 TCRBV5S1A1TA0A578 114 aa10.15□□□□□ -0.79
NOD1-208ENST00000489614 WDR91A4D1P6 747 aa10.15□□□□□ -0.79
NOD1-208ENST00000489614 CFAP69A5D8W1 941 aa10.15□□□□□ -0.79
NOD1-208ENST00000489614 GZMAP12544 262 aa10.15□□□□□ -0.79
NOD1-208ENST00000489614 CCL5P13501 91 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms