RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 GABBR2O75899 941 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 NDUFA10O95299 355 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 RALAP11233 206 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 ADH5P11766 374 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 UNGP13051 313 aaPredicted RBP11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 RARGP13631 454 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 CD19P15391 556 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 FNTBP49356 437 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 PGFP49763 221 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 BCAT1P54687 386 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 NOMO3P69849 1222 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 GAD2Q05329 585 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 GFPT1Q06210 699 aaPredicted RBP11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 CNGA2Q16280 664 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 GAB4Q2WGN9 574 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 DNTTIP2Q5QJE6 756 aaKnown RBP11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 PKN3Q6P5Z2 889 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 RHBDF2Q6PJF5 856 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 LCLAT1Q6UWP7 414 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 TOGARAM2Q6ZUX3 1019 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 HTR3DQ70Z44 454 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 SYT13Q7L8C5 426 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 PIGZQ86VD9 579 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 WDR5BQ86VZ2 330 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 DNAAF5Q86Y56 855 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 CCDC170Q8IYT3 715 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 CAMKK1Q8N5S9 505 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 RPLP0P6Q8NHW5 317 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 KLF16Q9BXK1 252 aaPredicted RBP11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 ZNHIT6Q9NWK9 470 aaKnown RBP11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 C2orf42Q9NWW7 574 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 OSER1Q9NX31 292 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 NCDNQ9UBB6 729 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 HESX1Q9UBX0 185 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 ADAMTS1Q9UHI8 967 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 DNMT3LQ9UJW3 386 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 NAGPAQ9UK23 515 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 LSM7Q9UK45 103 aaKnown RBP11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 TSPAN16Q9UKR8 245 aa11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 EPN1Q9Y6I3 576 aaPredicted RBP11.05□□□□□ -0.64
SCAMP4-208ENST00000489554 A0A0U1RQJ8 604 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 EIF3CLB5ME19 914 aaKnown RBP11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 TULP2O00295 520 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 SCAMP3O14828 347 aaKnown RBP11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 XPO1O14980 1071 aaKnown RBP11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 ARHGAP6O43182 974 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 HOXC11O43248 304 aaPredicted RBP11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 TBX18O95935 607 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 CCDC172P0C7W6 258 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 IRF1P10914 325 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 GPD2P43304 727 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 PLA2G4AP47712 749 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 DMWDQ09019 674 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 BST2Q10589 180 aaKnown RBP11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 PTP4A2Q12974 167 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 SIM2Q14190 667 aaPredicted RBP11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 SLC18A3Q16572 532 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 CLEC16AQ2KHT3 1053 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 GOLGA7BQ2TAP0 167 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 PREPLQ4J6C6 727 aaPredicted RBP11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 RAB41Q5JT25 222 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 C10orf120Q5SQS8 335 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 LY6G5CQ5SRR4 150 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 BTBD8Q5XKL5 378 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 HEATR6Q6AI08 1181 aaKnown RBP11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 SCD5Q86SK9 330 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 PASD1Q8IV76 773 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 BBS7Q8IWZ6 715 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 GPR161Q8N6U8 529 aaKnown RBP11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 ACRBPQ8NEB7 543 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 EZH1Q92800 747 aaPredicted RBP11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 PNKPQ96T60 521 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 EIF3CQ99613 913 aaKnown RBP11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 LHX5Q9H2C1 402 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 NMUR1Q9HB89 426 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 SPHK2Q9NRA0 654 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 GMEB2Q9UKD1 530 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 GVINP1Q7Z2Y8 2422 aa11.04□□□□□ -0.64
SCAMP4-208ENST00000489554 FAM170AA1A519 330 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 RCCD1A6NED2 376 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 K7EQS6 105 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 APODP05090 189 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 SETSIPP0DME0 302 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 GRIA2P42262 883 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 RPL34P49207 117 aaKnown RBP11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 TKTL1P51854 596 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 MRPS21P82921 87 aaKnown RBP11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 COG7P83436 770 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 CENPCQ03188 943 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 PDE4CQ08493 712 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 DMC1Q14565 340 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 STILQ15468 1287 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 TSR1Q2NL82 804 aaKnown RBP11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 HSF5Q4G112 596 aaPredicted RBP11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 PM20D1Q6GTS8 502 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 LAIR1Q6GTX8 287 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 PRR23BQ6ZRT6 265 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 C1orf131Q8NDD1 294 aaKnown RBP11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 USP33Q8TEY7 942 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 SLC35F5Q8WV83 523 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms