RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 EFHC2Q5JST6 749 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 CEP85LQ5SZL2 805 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 IZUMO3Q5VZ72 239 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 WSCD1Q658N2 575 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 KAZNQ674X7 775 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 OVOS1Q6IE37 1185 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 MFSD5Q6N075 450 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 VSTM1Q6UX27 236 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 KDM7AQ6ZMT4 941 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 AGMOQ6ZNB7 445 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 LYSMD3Q7Z3D4 306 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 ADAT2Q7Z6V5 191 aaKnown RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 TADA2BQ86TJ2 420 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 PIGZQ86VD9 579 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 TTC30AQ86WT1 665 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 CCNJLQ8IV13 435 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 PPIL6Q8IXY8 311 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 PDIK1LQ8N165 341 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 ACTL9Q8TC94 416 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 FBXO25Q8TCJ0 367 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 C1orf54Q8WWF1 131 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 WNT8BQ93098 351 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 FAM149B1Q96BN6 582 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 FAF2Q96CS3 445 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 TOX2Q96NM4 488 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 RNF157Q96PX1 679 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 CDK5RAP1Q96SZ6 601 aaKnown RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 TMEM175Q9BSA9 504 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 TRIM51Q9BSJ1 452 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 COLEC11Q9BWP8 271 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 HEMGNQ9BXL5 484 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 COL25A1Q9BXS0 654 aaPredicted RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 TRIM31Q9BZY9 425 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 KLC2Q9H0B6 622 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 TRPV6Q9H1D0 765 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 FAM204AQ9H8W3 233 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 TMBIM4Q9HC24 238 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 NGRNQ9NPE2 291 aaKnown RBP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.61□□□□□ -1.35
SF3A3-208ENST00000489537 FAM49BQ9NUQ9 324 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 HAUS2Q9NVX0 235 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 GRHL1Q9NZI5 618 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 FNIP2Q9P278 1114 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 HMGXB4Q9UGU5 601 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 MAFFQ9ULX9 164 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 PCDHB7Q9Y5E2 793 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 ACTL7BQ9Y614 415 aa6.61□□□□□ -1.35
SF3A3-208ENST00000489537 CHD7Q9P2D1 2997 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 CHD9Q3L8U1 2897 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 A0A087WUV0 522 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-208ENST00000489537 ERI2A8K979 691 aaKnown RBP6.6□□□□□ -1.35
SF3A3-208ENST00000489537 E7EVH7 732 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 RASGRF2O14827 1237 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 POLR3GO15318 223 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-208ENST00000489537 CHADO15335 359 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 RGS16O15492 202 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-208ENST00000489537 CDH16O75309 829 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 OAZ2O95190 189 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 ZBED1O96006 694 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 RBP3P10745 1247 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 NR1D1P20393 614 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 KLRC2P26717 231 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 FDFT1P37268 417 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 MAGEA11P43364 429 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 SCNN1GP51170 649 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 ARSEP51690 589 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 CLCNKBP51801 687 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 TKTL1P51854 596 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 KPNA1P52294 538 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-208ENST00000489537 ITGA8P53708 1063 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 EIF3EP60228 445 aaKnown RBP6.6□□□□□ -1.35
SF3A3-208ENST00000489537 COG7P83436 770 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 YWHAHQ04917 246 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-208ENST00000489537 DEUP1Q05D60 604 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 ZNF252P-AS1Q0IIN9 211 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 SCAPQ12770 1279 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 PDK1Q15118 436 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 NOMO1Q15155 1222 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 SHHQ15465 462 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 CCDC14Q49A88 953 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 C2CD6Q53TS8 623 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 DNAJC21Q5F1R6 531 aaKnown RBP6.6□□□□□ -1.35
SF3A3-208ENST00000489537 MDH1BQ5I0G3 518 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 RAB41Q5JT25 222 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 BRMS1LQ5PSV4 323 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 ZNF618Q5T7W0 954 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 C1orf53Q5VUE5 145 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 SLC9A4Q6AI14 798 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 HIBCHQ6NVY1 386 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-208ENST00000489537 SCYL2Q6P3W7 929 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 TTC27Q6P3X3 843 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 FAM171BQ6P995 826 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 DARS2Q6PI48 645 aaKnown RBP6.6□□□□□ -1.35
SF3A3-208ENST00000489537 SLC39A5Q6ZMH5 540 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 LRRC8DQ7L1W4 858 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 ANKS1BQ7Z6G8 1248 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 FAM35AQ86V20 835 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 SPATA2LQ8IUW3 424 aaPredicted RBP6.6□□□□□ -1.35
SF3A3-208ENST00000489537 GPR65Q8IYL9 337 aa6.6□□□□□ -1.35
SF3A3-208ENST00000489537 FUKQ8N0W3 1084 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms