RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ZNF174Q15697 407 aa15.9■□□□□ 0.14
UFD1-209ENST00000489406 FOXR1Q6PIV2 292 aa15.9■□□□□ 0.14
UFD1-209ENST00000489406 HS2ST1Q7LGA3 356 aa15.9■□□□□ 0.14
UFD1-209ENST00000489406 KCNK18Q7Z418 384 aa15.9■□□□□ 0.14
UFD1-209ENST00000489406 DIS3L2Q8IYB7 885 aaKnown RBP15.9■□□□□ 0.14
UFD1-209ENST00000489406 TOP6BLQ8N6T0 577 aa15.9■□□□□ 0.14
UFD1-209ENST00000489406 CIPCQ9C0C6 399 aa15.9■□□□□ 0.14
UFD1-209ENST00000489406 TMEM30AQ9NV96 361 aa15.9■□□□□ 0.14
UFD1-209ENST00000489406 ELOVL2Q9NXB9 296 aa15.9■□□□□ 0.14
UFD1-209ENST00000489406 GDAP2Q9NXN4 497 aa15.9■□□□□ 0.14
UFD1-209ENST00000489406 ATXN7L1Q9ULK2 861 aaPredicted RBP15.9■□□□□ 0.14
UFD1-209ENST00000489406 PMS2P1A4D2B8 440 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 H0YCG3 227 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 DNTTP04053 509 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 DUSP3P51452 185 aaPredicted RBP15.89■□□□□ 0.13
UFD1-209ENST00000489406 NXPH1P58417 271 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 RPS14P62263 151 aaKnown RBP15.89■□□□□ 0.13
UFD1-209ENST00000489406 TFAMQ00059 246 aaKnown RBP15.89■□□□□ 0.13
UFD1-209ENST00000489406 ZNF211Q13398 564 aaPredicted RBP15.89■□□□□ 0.13
UFD1-209ENST00000489406 NCAPHQ15003 741 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 TBR1Q16650 682 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 ISXQ2M1V0 245 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 ADALQ6DHV7 355 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 TMC6Q7Z403 805 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 NUP93Q8N1F7 819 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 ZNF366Q8N895 744 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 PRR11Q96HE9 360 aaPredicted RBP15.89■□□□□ 0.13
UFD1-209ENST00000489406 FAM84AQ96KN4 292 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 ORC3Q9UBD5 711 aaPredicted RBP15.89■□□□□ 0.13
UFD1-209ENST00000489406 LSM7Q9UK45 103 aaKnown RBP15.89■□□□□ 0.13
UFD1-209ENST00000489406 MYH11P35749 1972 aa15.89■□□□□ 0.13
UFD1-209ENST00000489406 A0A1B0GVM2 712 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 CDRT15L2A8MXV6 281 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 TISP43B9A030 160 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 ANKRD63C9JTQ0 380 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 TLR4O00206 839 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 SRSF6Q13247 344 aaKnown RBP15.88■□□□□ 0.13
UFD1-209ENST00000489406 MDH1BQ5I0G3 518 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 RUFY3Q7L099 469 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 OXR1Q8N573 874 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 C1orf127Q8N9H9 656 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 MYCBPAPQ8TBZ2 947 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 ZNF564Q8TBZ8 553 aaPredicted RBP15.88■□□□□ 0.13
UFD1-209ENST00000489406 KBTBD7Q8WVZ9 684 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 OVCA2Q8WZ82 227 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 ATXN7L3BQ96GX2 97 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 ABCG4Q9H172 646 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 ERVMER34-1Q9H9K5 563 aa15.88■□□□□ 0.13
UFD1-209ENST00000489406 NPHP3-ACAD11A0A0J9YXS1 232 aa15.87■□□□□ 0.13
UFD1-209ENST00000489406 RTN3O95197 1032 aaPredicted RBP15.87■□□□□ 0.13
UFD1-209ENST00000489406 TBX18O95935 607 aa15.87■□□□□ 0.13
UFD1-209ENST00000489406 KRT19P08727 400 aa15.87■□□□□ 0.13
UFD1-209ENST00000489406 FXR2P51116 673 aaKnown RBP eCLIP15.87■□□□□ 0.13
UFD1-209ENST00000489406 ARID5AQ03989 594 aa15.87■□□□□ 0.13
UFD1-209ENST00000489406 TTC31Q49AM3 519 aaPredicted RBP15.87■□□□□ 0.13
UFD1-209ENST00000489406 SNX30Q5VWJ9 437 aa15.87■□□□□ 0.13
UFD1-209ENST00000489406 ANKS1BQ7Z6G8 1248 aa15.87■□□□□ 0.13
UFD1-209ENST00000489406 SPATS2Q86XZ4 545 aaKnown RBP15.87■□□□□ 0.13
UFD1-209ENST00000489406 CSGALNACT2Q8N6G5 542 aa15.87■□□□□ 0.13
UFD1-209ENST00000489406 LRRC52Q8N7C0 313 aa15.87■□□□□ 0.13
UFD1-209ENST00000489406 SCAMP5Q8TAC9 235 aa15.87■□□□□ 0.13
UFD1-209ENST00000489406 WASF1Q92558 559 aa15.87■□□□□ 0.13
UFD1-209ENST00000489406 KLF16Q9BXK1 252 aaPredicted RBP15.87■□□□□ 0.13
UFD1-209ENST00000489406 GEMIN8Q9NWZ8 242 aaKnown RBP15.87■□□□□ 0.13
UFD1-209ENST00000489406 LARSQ9P2J5 1176 aaKnown RBP15.87■□□□□ 0.13
UFD1-209ENST00000489406 AGO2Q9UKV8 859 aaKnown RBP15.87■□□□□ 0.13
UFD1-209ENST00000489406 PP2D1A8MPX8 630 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 TNFSF15O95150 251 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 CENPBP07199 599 aaPredicted RBP15.86■□□□□ 0.13
UFD1-209ENST00000489406 ELAVL4P26378 380 aaKnown RBP15.86■□□□□ 0.13
UFD1-209ENST00000489406 TUBP50607 506 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 GALCP54803 685 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 WNT7BP56706 349 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 ZBTB16Q05516 673 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 CLCA4Q14CN2 919 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 E2F5Q15329 346 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 NCEH1Q6PIU2 408 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 CRELD2Q6UXH1 353 aaPredicted RBP15.86■□□□□ 0.13
UFD1-209ENST00000489406 NT5DC4Q86YG4 428 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 SLC25A45Q8N413 288 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 ARL14Q8N4G2 192 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 RBBP8NLQ8NC74 664 aaPredicted RBP15.86■□□□□ 0.13
UFD1-209ENST00000489406 GANCQ8TET4 914 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 HPS3Q969F9 1004 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 PIWIL1Q96J94 861 aaKnown RBP15.86■□□□□ 0.13
UFD1-209ENST00000489406 ZNF518BQ9C0D4 1074 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 TJP2Q9UDY2 1190 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 NCKAP1Q9Y2A7 1128 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 PCDHGA8Q9Y5G5 932 aa15.86■□□□□ 0.13
UFD1-209ENST00000489406 SETD2Q9BYW2 2564 aaPredicted RBP15.86■□□□□ 0.13
UFD1-209ENST00000489406 K7ENM7 598 aa15.85■□□□□ 0.13
UFD1-209ENST00000489406 TLR5O60602 858 aa15.85■□□□□ 0.13
UFD1-209ENST00000489406 IL18RAPO95256 599 aa15.85■□□□□ 0.13
UFD1-209ENST00000489406 CTDNEP1O95476 244 aa15.85■□□□□ 0.13
UFD1-209ENST00000489406 FDPSP14324 419 aaKnown RBP15.85■□□□□ 0.13
UFD1-209ENST00000489406 CASRP41180 1078 aa15.85■□□□□ 0.13
UFD1-209ENST00000489406 PGFP49763 221 aa15.85■□□□□ 0.13
UFD1-209ENST00000489406 KCNJ12Q14500 433 aa15.85■□□□□ 0.13
UFD1-209ENST00000489406 TGIF1Q15583 401 aa15.85■□□□□ 0.13
UFD1-209ENST00000489406 HS1BP3Q53T59 392 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms