RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 TCF4P15884 667 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 IL1R2P27930 398 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 CHKAP35790 457 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 GNL1P36915 607 aaPredicted RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 MAGEA6P43360 314 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 MAGEA9P43362 315 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 RAB27AP51159 221 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 EIF3EP60228 445 aaKnown RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 MRPS6P82932 125 aaKnown RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 ITIH4Q14624 930 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 LPIN1Q14693 890 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 DPYSL2Q16555 572 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 KYNUQ16719 465 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 KLHL38Q2WGJ6 581 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 MAP7D1Q3KQU3 841 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 UBXN11Q5T124 520 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 DAB2IPQ5VWQ8 1189 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 SLC9A4Q6AI14 798 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 OR6B2Q6IFH4 312 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 PSRC1Q6PGN9 363 aaPredicted RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 RFX6Q8HWS3 928 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 PDIK1LQ8N165 341 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 ATP11CQ8NB49 1132 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 PLPP7Q8NBV4 271 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 EPS8L3Q8TE67 593 aaKnown RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 ATXN2LQ8WWM7 1075 aaKnown RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 PPM1EQ8WY54 764 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 PRCCQ92733 491 aaPredicted RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 GRAMD1AQ96CP6 724 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 LRRC39Q96DD0 335 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 RNF157Q96PX1 679 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 SLC9A7Q96T83 725 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 HNRNPABQ99729 332 aaKnown RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 C11orf84Q9BUA3 381 aaPredicted RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 TRIM62Q9BVG3 475 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 EIF2AQ9BY44 585 aaKnown RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 ZWILCHQ9H900 591 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 AGO3Q9H9G7 860 aaKnown RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 RRN3Q9NYV6 651 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 PAK5Q9P286 719 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 DOLKQ9UPQ8 538 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 SMG5Q9UPR3 1016 aaKnown RBP8.79□□□□□ -1
VTI1A-207ENST00000489357 CDY2AQ9Y6F7 541 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 CLUHO75153 1309 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 LAMA3Q16787 3333 aa8.79□□□□□ -1
VTI1A-207ENST00000489357 LAMA2P24043 3122 aaKnown RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 ABHD14A-ACY1A0A1B0GW23 586 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 FAM170AA1A519 330 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 MYO1CO00159 1063 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 GABRDO14764 452 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 APOL1O14791 398 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 FAM155BO75949 473 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 FBXO21O94952 628 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 RBP3P10745 1247 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 CHN1P15882 459 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 TIMP2P16035 220 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 PECAM1P16284 738 aaPredicted RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 RPL9P32969 192 aaKnown RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 LHX1P48742 406 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 CDH6P55285 790 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 CDK16Q00536 496 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 ROR1Q01973 937 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 DPYSL3Q14195 570 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 KRT81Q14533 505 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 TRIP13Q15645 432 aaPredicted RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 CCDC14Q49A88 953 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 TXNRD3NBQ6F5E7 133 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 PMF1Q6P1K2 205 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 CNKSR3Q6P9H4 555 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 CYP4V2Q6ZWL3 525 aaPredicted RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 CPLX4Q7Z7G2 160 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 ACOT1Q86TX2 421 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 RTN4RL1Q86UN2 441 aaPredicted RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 EXOC3L1Q86VI1 746 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 TTC30AQ86WT1 665 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 CDKL3Q8IVW4 592 aaPredicted RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 CACNA2D3Q8IZS8 1091 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 EMC1Q8N766 993 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 NAT8LQ8N9F0 302 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 DBF4BQ8NFT6 615 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 OR6B3Q8NGW1 331 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 UBA3Q8TBC4 463 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 KBTBD7Q8WVZ9 684 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 TMEM40Q8WWA1 233 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 C18orf25Q96B23 403 aaPredicted RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 ALKBH8Q96BT7 664 aaKnown RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 ITPKCQ96DU7 683 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 ZNF317Q96PQ6 595 aaPredicted RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 FERMT1Q9BQL6 677 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 MRPL45Q9BRJ2 306 aaKnown RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 TMEM121Q9BTD3 319 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 DDX23Q9BUQ8 820 aaKnown RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 CALN1Q9BXU9 219 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 NXF3Q9H4D5 531 aaKnown RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 ACTR5Q9H9F9 607 aaPredicted RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 PPANQ9NQ55 473 aaKnown RBP8.78□□□□□ -1
VTI1A-207ENST00000489357 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.78□□□□□ -1
VTI1A-207ENST00000489357 KLHL11Q9NVR0 708 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 CXXC1Q9P0U4 656 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms