RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 LSM14AQ8ND56 463 aaKnown RBP17.02■□□□□ 0.32
USP48-210ENST00000489108 NXPE2Q96DL1 559 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 FCRL3Q96P31 734 aaPredicted RBP17.02■□□□□ 0.32
USP48-210ENST00000489108 OSGEPQ9NPF4 335 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 AGPAT3Q9NRZ7 376 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.02■□□□□ 0.32
USP48-210ENST00000489108 FTSJ1Q9UET6 329 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 AK5Q9Y6K8 562 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 TENM4Q6N022 2769 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 CLSTN1O94985 981 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 CASP4P49662 377 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 ZNF667Q5HYK9 610 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 C6orf118Q5T5N4 469 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 TMEM215Q68D42 235 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 C12orf29Q8N999 325 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 XXYLT1Q8NBI6 393 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 OR2T3Q8NH03 318 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 ZNF507Q8TCN5 953 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 JAKMIP2Q96AA8 810 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 BIRC7Q96CA5 298 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 CIPCQ9C0C6 399 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 VRTNQ9H8Y1 702 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 FAM49BQ9NUQ9 324 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 SMC3Q9UQE7 1217 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 MYLKQ15746 1914 aa17.01■□□□□ 0.31
USP48-210ENST00000489108 CFAP46Q8IYW2 2715 aa17■□□□□ 0.31
USP48-210ENST00000489108 ZNF462Q96JM2 2506 aa17■□□□□ 0.31
USP48-210ENST00000489108 HHLA1C9JL84 531 aa17■□□□□ 0.31
USP48-210ENST00000489108 CBX4O00257 560 aa17■□□□□ 0.31
USP48-210ENST00000489108 RRP8O43159 456 aaKnown RBP17■□□□□ 0.31
USP48-210ENST00000489108 FSBPO95073 299 aa17■□□□□ 0.31
USP48-210ENST00000489108 CHKAP35790 457 aa17■□□□□ 0.31
USP48-210ENST00000489108 CTSKP43235 329 aa17■□□□□ 0.31
USP48-210ENST00000489108 BMT2Q1RMZ1 405 aa17■□□□□ 0.31
USP48-210ENST00000489108 ZNF699Q32M78 642 aa17■□□□□ 0.31
USP48-210ENST00000489108 PRAMEF14Q5SWL7 426 aa17■□□□□ 0.31
USP48-210ENST00000489108 SERPINA13PQ6UXR4 307 aa17■□□□□ 0.31
USP48-210ENST00000489108 EPM2AIP1Q7L775 607 aaPredicted RBP17■□□□□ 0.31
USP48-210ENST00000489108 ANKS1BQ7Z6G8 1248 aa17■□□□□ 0.31
USP48-210ENST00000489108 CRYBG2Q8N1P7 616 aa17■□□□□ 0.31
USP48-210ENST00000489108 LHX5Q9H2C1 402 aa17■□□□□ 0.31
USP48-210ENST00000489108 HMGXB4Q9UGU5 601 aa17■□□□□ 0.31
USP48-210ENST00000489108 ZNF510Q9Y2H8 683 aa17■□□□□ 0.31
USP48-210ENST00000489108 CAPN9O14815 690 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 EIF3DO15371 548 aaKnown RBP eCLIP16.99■□□□□ 0.31
USP48-210ENST00000489108 TSPAN3O60637 253 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 SEMA4FO95754 770 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 HMBSP08397 361 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 CD27P26842 260 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 ADORA2BP29275 332 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 NDST1P52848 882 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 TARDBPQ13148 414 aaKnown RBP eCLIP16.99■□□□□ 0.311e-8■■■■■ 32.1
USP48-210ENST00000489108 DNAJC3Q13217 504 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 BIRC3Q13489 604 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 CAMK2GQ13555 558 aaPredicted RBP16.99■□□□□ 0.31
USP48-210ENST00000489108 E2F5Q15329 346 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 CLEC20AQ6ZU45 233 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 ADAT2Q7Z6V5 191 aaKnown RBP16.99■□□□□ 0.31
USP48-210ENST00000489108 SCD5Q86SK9 330 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 GATAD2AQ86YP4 633 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 PDILTQ8N807 584 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 PLEKHO2Q8TD55 490 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 BTBD1Q9H0C5 482 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 NAGPAQ9UK23 515 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 PCDHGA1Q9Y5H4 931 aa16.99■□□□□ 0.31
USP48-210ENST00000489108 MAST4O15021 2626 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 ENC1O14682 589 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 PAPSS1O43252 624 aaPredicted RBP16.98■□□□□ 0.31
USP48-210ENST00000489108 TIMM44O43615 452 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 CD2BP2O95400 341 aaKnown RBP16.98■□□□□ 0.31
USP48-210ENST00000489108 LDOC1O95751 146 aaPredicted RBP16.98■□□□□ 0.31
USP48-210ENST00000489108 FAM200BP0CF97 657 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 CORO1AP31146 461 aaKnown RBP16.98■□□□□ 0.31
USP48-210ENST00000489108 HNF1BP35680 557 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 CEBPZQ03701 1054 aaKnown RBP16.98■□□□□ 0.31
USP48-210ENST00000489108 ARID5AQ03989 594 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 NCOA4Q13772 614 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 EIF4HQ15056 248 aaKnown RBP16.98■□□□□ 0.31
USP48-210ENST00000489108 INAVAQ3KP66 663 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 PCSK4Q6UW60 755 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 GPR155Q7Z3F1 870 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 NELFCDQ8IXH7 590 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 ZNF366Q8N895 744 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 ORAI3Q9BRQ5 295 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 RASAL2Q9UJF2 1139 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 AGO1Q9UL18 857 aaKnown RBP16.98■□□□□ 0.31
USP48-210ENST00000489108 PCDHA5Q9Y5H7 936 aa16.98■□□□□ 0.31
USP48-210ENST00000489108 TP53BP1Q12888 1972 aaPredicted RBP16.98■□□□□ 0.31
USP48-210ENST00000489108 A0A1B0GTQ1 180 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 J3QKU1 62 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 DFNA5O60443 496 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 VNN1O95497 513 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 C4BPAP04003 597 aaKnown RBP16.97■□□□□ 0.31
USP48-210ENST00000489108 CYBBP04839 570 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 COG7P83436 770 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 CFHR1Q03591 330 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 RTP5Q14D33 572 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 DENND1CQ8IV53 801 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 ZNF276Q8N554 614 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 DDI1Q8WTU0 396 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms