RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 DNAH14Q0VDD8 3507 aa26.09■■□□□ 1.77
HMGN1-217ENST00000489072 KCNJ18B7U540 433 aa26.08■■□□□ 1.77
HMGN1-217ENST00000489072 ID4P47928 161 aa26.08■■□□□ 1.77
HMGN1-217ENST00000489072 HARS2P49590 506 aaKnown RBP26.08■■□□□ 1.77
HMGN1-217ENST00000489072 KCNJ12Q14500 433 aa26.08■■□□□ 1.77
HMGN1-217ENST00000489072 STK32AQ8WU08 396 aa26.08■■□□□ 1.77
HMGN1-217ENST00000489072 ZC3H10Q96K80 434 aaKnown RBP26.08■■□□□ 1.77
HMGN1-217ENST00000489072 ACOX2Q99424 681 aa26.08■■□□□ 1.77
HMGN1-217ENST00000489072 DNAJC12Q9UKB3 198 aa26.08■■□□□ 1.77
HMGN1-217ENST00000489072 CLEC4EQ9ULY5 219 aa26.08■■□□□ 1.77
HMGN1-217ENST00000489072 LRP3O75074 770 aa26.07■■□□□ 1.76
HMGN1-217ENST00000489072 WASP42768 502 aa26.07■■□□□ 1.76
HMGN1-217ENST00000489072 PLK5Q496M5 336 aa26.07■■□□□ 1.76
HMGN1-217ENST00000489072 DUSP15Q9H1R2 295 aaPredicted RBP26.07■■□□□ 1.76
HMGN1-217ENST00000489072 STOML2Q9UJZ1 356 aa26.07■■□□□ 1.76
HMGN1-217ENST00000489072 SLC27A6Q9Y2P4 619 aa26.07■■□□□ 1.76
HMGN1-217ENST00000489072 NFE2L3Q9Y4A8 694 aa26.07■■□□□ 1.76
HMGN1-217ENST00000489072 THADAQ6YHU6 1953 aa26.07■■□□□ 1.76
HMGN1-217ENST00000489072 GFRA2O00451 464 aa26.06■■□□□ 1.76
HMGN1-217ENST00000489072 PAPSS1O43252 624 aaPredicted RBP26.06■■□□□ 1.76
HMGN1-217ENST00000489072 IGLV3-27P01718 113 aa26.06■■□□□ 1.76
HMGN1-217ENST00000489072 PNMA6AP0CW24 399 aaPredicted RBP26.06■■□□□ 1.76
HMGN1-217ENST00000489072 ACADSBP45954 432 aa26.06■■□□□ 1.76
HMGN1-217ENST00000489072 KCNMA1Q12791 1236 aa26.06■■□□□ 1.76
HMGN1-217ENST00000489072 TRMT11Q7Z4G4 463 aaKnown RBP26.06■■□□□ 1.76
HMGN1-217ENST00000489072 GOLGA1Q92805 767 aa26.06■■□□□ 1.76
HMGN1-217ENST00000489072 POLMQ9NP87 494 aaPredicted RBP26.06■■□□□ 1.76
HMGN1-217ENST00000489072 SEMA4GQ9NTN9 838 aa26.06■■□□□ 1.76
HMGN1-217ENST00000489072 TJP2Q9UDY2 1190 aa26.06■■□□□ 1.76
HMGN1-217ENST00000489072 TCRBV21S2A2A0A5A6 115 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 E5RJQ4 531 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 FOXN3O00409 490 aaPredicted RBP26.05■■□□□ 1.76
HMGN1-217ENST00000489072 TSPAN3O60637 253 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 ALDH1A2O94788 518 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 EPN2O95208 641 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 CYBBP04839 570 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 NTSR1P30989 418 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 USP39Q53GS9 565 aaKnown RBP26.05■■□□□ 1.76
HMGN1-217ENST00000489072 TCP11X2Q5H9J9 407 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 TMEM110Q86TL2 294 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 WDTC1Q8N5D0 677 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 OLIG1Q8TAK6 271 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 ENOX1Q8TC92 643 aaKnown RBP26.05■■□□□ 1.76
HMGN1-217ENST00000489072 DQX1Q8TE96 717 aaKnown RBP26.05■■□□□ 1.76
HMGN1-217ENST00000489072 DDI1Q8WTU0 396 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 HMGB4Q8WW32 186 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 PIWIL1Q96J94 861 aaKnown RBP26.05■■□□□ 1.76
HMGN1-217ENST00000489072 LOXL4Q96JB6 756 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 ARRDC1-AS1Q9H2J1 176 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 NAALADL1Q9UQQ1 740 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.05■■□□□ 1.76
HMGN1-217ENST00000489072 PLXND1Q9Y4D7 1925 aa26.05■■□□□ 1.76
HMGN1-217ENST00000489072 LATS1O95835 1130 aa26.04■■□□□ 1.76
HMGN1-217ENST00000489072 NCAM1P13591 858 aa26.04■■□□□ 1.76
HMGN1-217ENST00000489072 HOXB2P14652 356 aa26.04■■□□□ 1.76
HMGN1-217ENST00000489072 EEF1GP26641 437 aaKnown RBP26.04■■□□□ 1.76
HMGN1-217ENST00000489072 CLCN1P35523 988 aa26.04■■□□□ 1.76
HMGN1-217ENST00000489072 PDCLQ13371 301 aa26.04■■□□□ 1.76
HMGN1-217ENST00000489072 GEN1Q17RS7 908 aa26.04■■□□□ 1.76
HMGN1-217ENST00000489072 FAM149B1Q96BN6 582 aa26.04■■□□□ 1.76
HMGN1-217ENST00000489072 CD248Q9HCU0 757 aa26.04■■□□□ 1.76
HMGN1-217ENST00000489072 PCDHGC3Q9UN70 934 aa26.04■■□□□ 1.76
HMGN1-217ENST00000489072 NUP205Q92621 2012 aa26.04■■□□□ 1.76
HMGN1-217ENST00000489072 LAMA1P25391 3075 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 A0A1W2PQF6 199 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 SART1O43290 800 aaKnown RBP26.03■■□□□ 1.76
HMGN1-217ENST00000489072 BCKDHBP21953 392 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 HOXD9P28356 352 aaPredicted RBP26.03■■□□□ 1.76
HMGN1-217ENST00000489072 TBX4P57082 545 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 LMNB2Q03252 620 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 CSRP2Q16527 193 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 RSPO4Q2I0M5 234 aaPredicted RBP26.03■■□□□ 1.76
HMGN1-217ENST00000489072 MPPE1Q53F39 396 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 ADGRF1Q5T601 910 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 CDKAL1Q5VV42 579 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 SMYD5Q6GMV2 418 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 PASD1Q8IV76 773 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 CHPFQ8IZ52 775 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 CACNA2D2Q9NY47 1150 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 TAB2Q9NYJ8 693 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 BCCIPQ9P287 314 aaKnown RBP eCLIP26.03■■□□□ 1.76
HMGN1-217ENST00000489072 FHOD1Q9Y613 1164 aa26.03■■□□□ 1.76
HMGN1-217ENST00000489072 GOLGA6L22H0YM25 854 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 PES1O00541 588 aaKnown RBP26.02■■□□□ 1.76
HMGN1-217ENST00000489072 SGSHP51688 502 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 PTK2Q05397 1052 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 RING1Q06587 406 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 CCDC6Q16204 474 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 SYPL2Q5VXT5 272 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 C11orf57Q6ZUT1 292 aaPredicted RBP26.02■■□□□ 1.76
HMGN1-217ENST00000489072 SLC47A2Q86VL8 602 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 FAM71AQ8IYT1 594 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 ADAM32Q8TC27 787 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 RLN3Q8WXF3 142 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 ERLEC1Q96DZ1 483 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 FCRL2Q96LA5 508 aaPredicted RBP26.02■■□□□ 1.76
HMGN1-217ENST00000489072 CPXM1Q96SM3 734 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 GABRG3Q99928 467 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 GON4LQ3T8J9 2241 aa26.02■■□□□ 1.76
HMGN1-217ENST00000489072 GOLGA6L7A0A1B0GV03 622 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms