RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CLEC9AQ6UXN8 241 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.27□□□□□ -1.89
CCDC93-209ENST00000488908 DIS3LQ8TF46 1054 aaKnown RBP3.27□□□□□ -1.89
CCDC93-209ENST00000488908 MAML1Q92585 1016 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 CENPIQ92674 756 aaPredicted RBP3.27□□□□□ -1.89
CCDC93-209ENST00000488908 SUCLG2Q96I99 432 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 SENP7Q9BQF6 1050 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 WDR83Q9BRX9 315 aaKnown RBP3.27□□□□□ -1.89
CCDC93-209ENST00000488908 RNF26Q9BY78 433 aaPredicted RBP3.27□□□□□ -1.89
CCDC93-209ENST00000488908 FAM83DQ9H4H8 585 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 ZMAT3Q9HA38 289 aaKnown RBP3.27□□□□□ -1.89
CCDC93-209ENST00000488908 ZNF556Q9HAH1 456 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 IPO11Q9UI26 975 aaKnown RBP3.27□□□□□ -1.89
CCDC93-209ENST00000488908 SLC27A6Q9Y2P4 619 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 INSL5Q9Y5Q6 135 aa3.27□□□□□ -1.89
CCDC93-209ENST00000488908 TTC34A8MYJ7 566 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 FAM227AF5H4B4 570 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 H3BML4 177 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 CHRNB1P11230 501 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 RBL1P28749 1068 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 NTSR1P30989 418 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 VPS41P49754 854 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 AGFG1P52594 562 aaKnown RBP3.26□□□□□ -1.89
CCDC93-209ENST00000488908 RAE1P78406 368 aaKnown RBP3.26□□□□□ -1.89
CCDC93-209ENST00000488908 SLC29A2Q14542 456 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 C6orf10Q5SRN2 563 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 IFIT1BQ5T764 474 aaKnown RBP3.26□□□□□ -1.89
CCDC93-209ENST00000488908 TTLL5Q6EMB2 1281 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 MZT2AQ6P582 158 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 MICU3Q86XE3 530 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 TMEM174Q8WUU8 243 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 TTLL2Q9BWV7 592 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 GATA5Q9BWX5 397 aaPredicted RBP3.26□□□□□ -1.89
CCDC93-209ENST00000488908 CDT1Q9H211 546 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 TASP1Q9H6P5 420 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 TCF7L1Q9HCS4 588 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 ASNSD1Q9NWL6 643 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 DNAJB11Q9UBS4 358 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 GABBR1Q9UBS5 961 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 HDAC9Q9UKV0 1011 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 SCN5AQ14524 2016 aa3.26□□□□□ -1.89
CCDC93-209ENST00000488908 A6NNC1 897 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 UBXN7O94888 489 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 SLC3A2P08195 630 aaKnown RBP3.25□□□□□ -1.89
CCDC93-209ENST00000488908 TPH1P17752 444 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 TCEA1P23193 301 aaKnown RBP3.25□□□□□ -1.89
CCDC93-209ENST00000488908 SLC7A1P30825 629 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 SOX2P48431 317 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 CPT1AP50416 773 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 COPAP53621 1224 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 EVA1CP58658 441 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 ROR2Q01974 943 aaKnown RBP3.25□□□□□ -1.89
CCDC93-209ENST00000488908 GAD2Q05329 585 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 DDR1Q08345 913 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 ZNF267Q14586 743 aaPredicted RBP3.25□□□□□ -1.89
CCDC93-209ENST00000488908 SHBQ15464 509 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 ANO6Q4KMQ2 910 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 PRAMEF19Q5SWL8 479 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 RNF187Q5TA31 235 aaPredicted RBP3.25□□□□□ -1.89
CCDC93-209ENST00000488908 ISM2Q6H9L7 571 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 GRHL2Q6ISB3 625 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 ZBTB46Q86UZ6 589 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 CELF1Q92879 486 aaKnown RBP3.25□□□□□ -1.89
CCDC93-209ENST00000488908 EME1Q96AY2 570 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 CHMP4CQ96CF2 233 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 STK31Q9BXU1 1019 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 SLC12A5Q9H2X9 1139 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 SAP30LQ9HAJ7 183 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 ANKRD6Q9Y2G4 727 aa3.25□□□□□ -1.89
CCDC93-209ENST00000488908 A0A1B0GUV1 79 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 TRIM43BA6NCK2 446 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 RAB27BO00194 218 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 TBX3O15119 743 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 IFNA2P01563 188 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 ACVR2AP27037 513 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 DUSP1P28562 367 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 HOXD12P35452 270 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 KRTAP10-12P60413 245 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 ERVFC1-1P60608 527 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 CRYZQ08257 329 aaKnown RBP3.24□□□□□ -1.89
CCDC93-209ENST00000488908 KRT71Q3SY84 523 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 FSTL5Q8N475 847 aaPredicted RBP3.24□□□□□ -1.89
CCDC93-209ENST00000488908 IL31RAQ8NI17 732 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 TRIM43Q96BQ3 446 aaPredicted RBP3.24□□□□□ -1.89
CCDC93-209ENST00000488908 ZDHHC12Q96GR4 267 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 PRR11Q96HE9 360 aaPredicted RBP3.24□□□□□ -1.89
CCDC93-209ENST00000488908 HES6Q96HZ4 224 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 CDCP1Q9H5V8 836 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 AAMDCQ9H7C9 122 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 ABHD10Q9NUJ1 306 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 VPS4AQ9UN37 437 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 COL15A1P39059 1388 aa3.24□□□□□ -1.89
CCDC93-209ENST00000488908 DENND3A2RUS2 1198 aa3.23□□□□□ -1.89
CCDC93-209ENST00000488908 DPPA5A6NC42 116 aa3.23□□□□□ -1.89
CCDC93-209ENST00000488908 BTBD18B2RXH4 712 aa3.23□□□□□ -1.89
CCDC93-209ENST00000488908 PRYO14603 147 aa3.23□□□□□ -1.89
CCDC93-209ENST00000488908 DDNO94850 711 aaPredicted RBP3.23□□□□□ -1.89
CCDC93-209ENST00000488908 INMTO95050 263 aa3.23□□□□□ -1.89
CCDC93-209ENST00000488908 PF4V1P10720 104 aa3.23□□□□□ -1.89
CCDC93-209ENST00000488908 CPA1P15085 419 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms