RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PSEN1P49768 467 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 TAF5Q15542 800 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 BSPRYQ5W0U4 402 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 SND1Q7KZF4 910 aaKnown RBP eCLIP20.19■□□□□ 0.82
CCM2-216ENST00000488727 OTOP3Q7RTS5 596 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.19■□□□□ 0.821e-6■■■■■ 58.1
CCM2-216ENST00000488727 RNF38Q9H0F5 515 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 GDE1Q9NZC3 331 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 ADAM22Q9P0K1 906 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 NUDT5Q9UKK9 219 aa20.19■□□□□ 0.82
CCM2-216ENST00000488727 DDX3YO15523 660 aaKnown RBP20.18■□□□□ 0.82
CCM2-216ENST00000488727 TLR5O60602 858 aa20.18■□□□□ 0.82
CCM2-216ENST00000488727 OLFM2O95897 454 aa20.18■□□□□ 0.82
CCM2-216ENST00000488727 SYF2O95926 243 aaKnown RBP20.18■□□□□ 0.82
CCM2-216ENST00000488727 LTFP02788 710 aa20.18■□□□□ 0.82
CCM2-216ENST00000488727 ABCB4P21439 1286 aa20.18■□□□□ 0.82
CCM2-216ENST00000488727 DDX6P26196 483 aaKnown RBP eCLIP20.18■□□□□ 0.82
CCM2-216ENST00000488727 TUBP50607 506 aa20.18■□□□□ 0.82
CCM2-216ENST00000488727 SNX16P57768 344 aa20.18■□□□□ 0.82
CCM2-216ENST00000488727 MCOLN2Q8IZK6 566 aa20.18■□□□□ 0.82
CCM2-216ENST00000488727 CMTM8Q8IZV2 173 aa20.18■□□□□ 0.82
CCM2-216ENST00000488727 ARHGAP18Q8N392 663 aa20.18■□□□□ 0.82
CCM2-216ENST00000488727 ARL14EPQ8N8R7 260 aaPredicted RBP20.18■□□□□ 0.82
CCM2-216ENST00000488727 ST13P5Q8NFI4 369 aaPredicted RBP20.18■□□□□ 0.82
CCM2-216ENST00000488727 KHSRPQ92945 711 aaKnown RBP eCLIP20.18■□□□□ 0.82
CCM2-216ENST00000488727 CLIC5Q9NZA1 410 aa20.18■□□□□ 0.82
CCM2-216ENST00000488727 VPS18Q9P253 973 aa20.18■□□□□ 0.82
CCM2-216ENST00000488727 ADAM21Q9UKJ8 722 aa20.18■□□□□ 0.82
CCM2-216ENST00000488727 SART1O43290 800 aaKnown RBP20.17■□□□□ 0.82
CCM2-216ENST00000488727 COCHO43405 550 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 TBX18O95935 607 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 FYNP06241 537 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 RARGP13631 454 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 SLC6A3Q01959 620 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 FAM78AQ5JUQ0 283 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 HECTD3Q5T447 861 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 PHLDB2Q86SQ0 1253 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 ZDHHC17Q8IUH5 632 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 TDRD5Q8NAT2 981 aaKnown RBP20.17■□□□□ 0.82
CCM2-216ENST00000488727 ZSCAN18Q8TBC5 510 aaPredicted RBP20.17■□□□□ 0.82
CCM2-216ENST00000488727 EDEM1Q92611 657 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 FAM149B1Q96BN6 582 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 SMG9Q9H0W8 520 aaKnown RBP20.17■□□□□ 0.82
CCM2-216ENST00000488727 CARD9Q9H257 536 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 EPS15L1Q9UBC2 864 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 PRDM4Q9UKN5 801 aa20.17■□□□□ 0.82
CCM2-216ENST00000488727 SOBPA7XYQ1 873 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 RAD51CO43502 376 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 FTLP02792 175 aaPredicted RBP20.16■□□□□ 0.82
CCM2-216ENST00000488727 HDCP19113 662 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 GPC5P78333 572 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 MRPS25P82663 173 aaKnown RBP20.16■□□□□ 0.82
CCM2-216ENST00000488727 C1QBPQ07021 282 aaKnown RBP20.16■□□□□ 0.82
CCM2-216ENST00000488727 BTBD8Q5XKL5 378 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 SLC26A9Q7LBE3 791 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 ACSF2Q96CM8 615 aaPredicted RBP20.16■□□□□ 0.82
CCM2-216ENST00000488727 ASB16Q96NS5 453 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 ZFP37Q9Y6Q3 630 aaPredicted RBP20.16■□□□□ 0.82
CCM2-216ENST00000488727 VCANP13611 3396 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 TRAV19A0A0A6YYK7 116 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 GOLGA8SH3BPF8 625 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 GRAP2O75791 330 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 PRAMEF12O95522 483 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 CALB1P05937 261 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 GSCP56915 257 aaPredicted RBP20.16■□□□□ 0.82
CCM2-216ENST00000488727 GUCY2DQ02846 1103 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 ZP2Q05996 745 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 ZNF268Q14587 947 aaPredicted RBP20.16■□□□□ 0.82
CCM2-216ENST00000488727 ARID3BQ8IVW6 561 aaPredicted RBP20.16■□□□□ 0.82
CCM2-216ENST00000488727 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.16■□□□□ 0.82
CCM2-216ENST00000488727 ADHFE1Q8IWW8 467 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 ZNF276Q8N554 614 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 MREGQ8N565 214 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 EPB41L5Q9HCM4 733 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 ABCC13Q9NSE7 274 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 ZMYM5Q9UJ78 669 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 STRIP2Q9ULQ0 834 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 NR2E1Q9Y466 385 aa20.16■□□□□ 0.82
CCM2-216ENST00000488727 TCRBV5S1A1TA0A578 114 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 LOC730098B7Z3J9 87 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 AGPSO00116 658 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 MDM4O15151 490 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 CKMP06732 381 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 RALAP11233 206 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 FCARP24071 287 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 AVPR1AP37288 418 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 RNASE9P60153 205 aaKnown RBP20.15■□□□□ 0.82
CCM2-216ENST00000488727 YWHAZP63104 245 aaKnown RBP20.15■□□□□ 0.82
CCM2-216ENST00000488727 ZXDBP98169 803 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 EFHC1Q5JVL4 640 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 FAM102AQ5T9C2 384 aaPredicted RBP20.15■□□□□ 0.82
CCM2-216ENST00000488727 ALS2CLQ60I27 953 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 PPP1R2P3Q6NXS1 205 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 CASKIN2Q8WXE0 1202 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 SMARCD2Q92925 531 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 GDAP1L1Q96MZ0 367 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 ZMYND15Q9H091 742 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 ASNSD1Q9NWL6 643 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 PRKAG3Q9UGI9 489 aa20.15■□□□□ 0.82
CCM2-216ENST00000488727 NAALADL1Q9UQQ1 740 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms