RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 XYLT1Q86Y38 959 aa16.68■□□□□ 0.26
ERGIC3-216ENST00000488384 C1orf210Q8IVY1 113 aa16.68■□□□□ 0.26
ERGIC3-216ENST00000488384 DEFB106AQ8N104 65 aa16.68■□□□□ 0.26
ERGIC3-216ENST00000488384 PHTF2Q8N3S3 785 aa16.68■□□□□ 0.26
ERGIC3-216ENST00000488384 ZNF397Q8NF99 534 aaPredicted RBP16.68■□□□□ 0.26
ERGIC3-216ENST00000488384 C18orf8Q96DM3 657 aa16.68■□□□□ 0.26
ERGIC3-216ENST00000488384 FCRL2Q96LA5 508 aaPredicted RBP16.68■□□□□ 0.26
ERGIC3-216ENST00000488384 SERPINB11Q96P15 392 aa16.68■□□□□ 0.26
ERGIC3-216ENST00000488384 SYT11Q9BT88 431 aa16.68■□□□□ 0.26
ERGIC3-216ENST00000488384 IER2Q9BTL4 223 aa16.68■□□□□ 0.26
ERGIC3-216ENST00000488384 SPATA6Q9NWH7 488 aaPredicted RBP16.68■□□□□ 0.26
ERGIC3-216ENST00000488384 NEDD8-MDP1E9PL57 170 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 IRAK2O43187 625 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 TRUB2O95900 331 aaKnown RBP16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 UNGP13051 313 aaPredicted RBP16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 TYRP14679 529 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 MMP8P22894 467 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 SCNN1AP37088 669 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 HARS2P49590 506 aaKnown RBP16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 TBX4P57082 545 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 CENPCQ03188 943 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 KDSRQ06136 332 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 CLEC16AQ2KHT3 1053 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 DCAF6Q58WW2 860 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 MMS22LQ6ZRQ5 1243 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 TPGS1Q6ZTW0 290 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 IRF2BP2Q7Z5L9 587 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 MAML2Q8IZL2 1156 aaPredicted RBP16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 SYNPOQ8N3V7 929 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 CPXM2Q8N436 756 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 MSANTD4Q8NCY6 345 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 EXOC4Q96A65 974 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 SLC39A13Q96H72 371 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 AGPAT1Q99943 283 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 BBS2Q9BXC9 721 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 EDEM3Q9BZQ6 932 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 XPO4Q9C0E2 1151 aaKnown RBP16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 PRMT8Q9NR22 394 aaPredicted RBP16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 STOML2Q9UJZ1 356 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 TLR6Q9Y2C9 796 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 CACNA1IQ9P0X4 2223 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 VPS13AQ96RL7 3174 aa16.67■□□□□ 0.26
ERGIC3-216ENST00000488384 GFRA2O00451 464 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 CACNG3O60359 315 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 TULP3O75386 442 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 LATS1O95835 1130 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 PENKP01210 267 aaPredicted RBP16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 CCDC172P0C7W6 258 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 CHKAP35790 457 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 PTP4A2Q12974 167 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 EIF4EBP2Q13542 120 aaPredicted RBP16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 ASIC2Q16515 512 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 FAM102AQ5T9C2 384 aaPredicted RBP16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 OTUD1Q5VV17 481 aaPredicted RBP16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 FYB2Q5VWT5 728 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 NUGGCQ68CJ6 796 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 PKN3Q6P5Z2 889 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 SFTPA1Q8IWL2 248 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 NAT16Q8N8M0 369 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 SLC30A5Q8TAD4 765 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 BHMTQ93088 406 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 PNKPQ96T60 521 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 C11orf70Q9BRQ4 267 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 FAM204AQ9H8W3 233 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 WDR35Q9P2L0 1181 aa16.66■□□□□ 0.26
ERGIC3-216ENST00000488384 A0A1W2PQJ5 194 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 PROB1E7EW31 1015 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 RNF40O75150 1001 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 KAT7O95251 611 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 CHRM1P11229 460 aaPredicted RBP16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 NSFP46459 744 aaKnown RBP16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 FBXO43Q4G163 708 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 SFMBT2Q5VUG0 894 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 MAMSTRQ6ZN01 415 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 UNC45BQ8IWX7 931 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 SPEM1Q8N4L4 309 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 NUP58Q9BVL2 599 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 ADAM33Q9BZ11 813 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 ARHGEF4Q9NR80 690 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 SEPT11Q9NVA2 429 aaKnown RBP16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 C2orf42Q9NWW7 574 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 PLK2Q9NYY3 685 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 AIPL1Q9NZN9 384 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 ITIH6Q6UXX5 1313 aa16.65■□□□□ 0.26
ERGIC3-216ENST00000488384 ANTXRLA6NF34 631 aa16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 GOLGA8SH3BPF8 625 aa16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 K7EQS6 105 aa16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 TRIM24O15164 1050 aa16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 LAMTOR5O43504 91 aa16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 PRKCIP41743 596 aa16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 MATKP42679 507 aa16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 CDK17Q00537 523 aa16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 SATB1Q01826 763 aa16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 FAM133BQ5BKY9 247 aaKnown RBP16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 ADGRF1Q5T601 910 aa16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 NADSYN1Q6IA69 706 aa16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 TRNP1Q6NT89 227 aa16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 PHF13Q86YI8 300 aaPredicted RBP16.64■□□□□ 0.25
ERGIC3-216ENST00000488384 XPO6Q96QU8 1125 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms