RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 C4orf50Q6ZRC1 276 aa14.23□□□□□ -0.13
COPS7B-221ENST00000488111 GATA6Q92908 595 aa14.23□□□□□ -0.13
COPS7B-221ENST00000488111 ZCWPW1Q9H0M4 648 aa14.23□□□□□ -0.13
COPS7B-221ENST00000488111 EURLQ9NYK6 297 aa14.23□□□□□ -0.13
COPS7B-221ENST00000488111 PHTF1Q9UMS5 762 aa14.23□□□□□ -0.13
COPS7B-221ENST00000488111 MAGEA13PA6NCF6 341 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 GABRDO14764 452 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 MED7O43513 233 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 HNRNPCL1O60812 293 aaKnown RBP14.22□□□□□ -0.13
COPS7B-221ENST00000488111 ASMTLO95671 621 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 CCDC130P13994 396 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 NSFP46459 744 aaKnown RBP14.22□□□□□ -0.13
COPS7B-221ENST00000488111 FPGSQ05932 587 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 KHDC1Q4VXA5 237 aaKnown RBP14.22□□□□□ -0.13
COPS7B-221ENST00000488111 TMEM173Q86WV6 379 aaPredicted RBP14.22□□□□□ -0.13
COPS7B-221ENST00000488111 C10orf82Q8WW14 230 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 LRRC19Q9H756 370 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 DMAP1Q9NPF5 467 aaPredicted RBP14.22□□□□□ -0.13
COPS7B-221ENST00000488111 LMCD1Q9NZU5 365 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 TSPAN16Q9UKR8 245 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 NAALADL1Q9UQQ1 740 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 MICAL3Q7RTP6 2002 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 FAM47DPA6NHR8 397 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 M0QYV0 167 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 CDH16O75309 829 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 TJP3O95049 919 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 FGBP02675 491 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 GALTP07902 379 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 PFKMP08237 780 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 PYGMP11217 842 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 ODC1P11926 461 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 KCNJ1P48048 391 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 CACNA2D1P54289 1103 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 LRRC23Q53EV4 343 aaPredicted RBP14.22□□□□□ -0.13
COPS7B-221ENST00000488111 SNX30Q5VWJ9 437 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 ZNF449Q6P9G9 518 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 SRRM1Q8IYB3 904 aaKnown RBP14.22□□□□□ -0.13
COPS7B-221ENST00000488111 NRG4Q8WWG1 115 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 DPF3Q92784 378 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 PTPRN2Q92932 1015 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 CD101Q93033 1021 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 B3GALT6Q96L58 329 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 C11orf70Q9BRQ4 267 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 MRPL9Q9BYD2 267 aaKnown RBP14.22□□□□□ -0.13
COPS7B-221ENST00000488111 FAM124BQ9H5Z6 455 aaPredicted RBP14.22□□□□□ -0.13
COPS7B-221ENST00000488111 NINJ2Q9NZG7 142 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 PDP2Q9P2J9 529 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 CYTH4Q9UIA0 394 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 PCDHGC3Q9UN70 934 aa14.22□□□□□ -0.13
COPS7B-221ENST00000488111 CCDC85CA6NKD9 419 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 M0QZQ0 153 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 CBX6O95503 412 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 ITIH2P19823 946 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 ADORA2BP29275 332 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 CENPCQ03188 943 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 PPIGQ13427 754 aaKnown RBP eCLIP14.21□□□□□ -0.132e-6■□□□□ 9.8
COPS7B-221ENST00000488111 KYNUQ16719 465 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 GOLGA7BQ2TAP0 167 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 TRIM72Q6ZMU5 477 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 MCOLN2Q8IZK6 566 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 CRYBG2Q8N1P7 616 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 TMEM86AQ8N2M4 240 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 LRRC43Q8N309 656 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 B3GALNT2Q8NCR0 500 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 SCG3Q8WXD2 468 aaKnown RBP14.21□□□□□ -0.13
COPS7B-221ENST00000488111 ZNF653Q96CK0 615 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 ABHD8Q96I13 439 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 SUSD3Q96L08 255 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 SAR1AQ9NR31 198 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 MARCH5Q9NX47 278 aa14.21□□□□□ -0.13
COPS7B-221ENST00000488111 CXXC1Q9P0U4 656 aaPredicted RBP14.21□□□□□ -0.13
COPS7B-221ENST00000488111 ALPK3Q96L96 1907 aa14.21□□□□□ -0.14
COPS7B-221ENST00000488111 EDF1O60869 148 aaKnown RBP14.2□□□□□ -0.14
COPS7B-221ENST00000488111 PTPN1P18031 435 aaKnown RBP14.2□□□□□ -0.14
COPS7B-221ENST00000488111 TKTP29401 623 aaKnown RBP14.2□□□□□ -0.14
COPS7B-221ENST00000488111 RANBP1P43487 201 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 GPC5P78333 572 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 DNAJC3Q13217 504 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 SPOUT1Q5T280 376 aaKnown RBP14.2□□□□□ -0.14
COPS7B-221ENST00000488111 METTL23Q86XA0 190 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 KLHL23Q8NBE8 558 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 TMEM35BQ8NCS4 154 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 DENND1AQ8TEH3 1009 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 NCSTNQ92542 709 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 MIPEPQ99797 713 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 RTP3Q9BQQ7 232 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 GPR62Q9BZJ7 368 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 TJP2Q9UDY2 1190 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 KIAA1257Q9ULG3 409 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 MYBPHLA2RUH7 354 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 PIK3R2O00459 728 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 CLDN5O00501 218 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 COMTP21964 271 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 LHX1P48742 406 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 CCDC6Q16204 474 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 SLC45A4Q5BKX6 768 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 MDH1BQ5I0G3 518 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 OVOS1Q6IE37 1185 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 RFWD3Q6PCD5 774 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 LCLAT1Q6UWP7 414 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms