RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 PCDHB7Q9Y5E2 793 aa6.49□□□□□ -1.37
CUL3-211ENST00000487558 ITIH6Q6UXX5 1313 aa6.49□□□□□ -1.37
CUL3-211ENST00000487558 WDR33Q9C0J8 1336 aaKnown RBP6.49□□□□□ -1.37
CUL3-211ENST00000487558 LMTK3Q96Q04 1460 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 LOC105369274A0A096LPK9 316 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 LOC102723532A0A0G2JNH3 316 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 TSPAN3O60637 253 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 ZNF37AP17032 561 aaPredicted RBP6.48□□□□□ -1.37
CUL3-211ENST00000487558 ADRA1DP25100 572 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 TUBP50607 506 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 TPTEP56180 551 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 RBM6P78332 1123 aaKnown RBP6.48□□□□□ -1.37
CUL3-211ENST00000487558 CBFBQ13951 182 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 AAK1Q2M2I8 961 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 PLAC9Q5JTB6 97 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 ABHD17BQ5VST6 288 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 DENND2CQ68D51 928 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 RASGRP2Q7LDG7 609 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 HEATR4Q86WZ0 1026 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 OR4N4Q8N0Y3 316 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 TSPYL6Q8N831 410 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.48□□□□□ -1.37
CUL3-211ENST00000487558 FSIP1Q8NA03 581 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 CACTINQ8WUQ7 758 aaKnown RBP6.48□□□□□ -1.37
CUL3-211ENST00000487558 HDAC2Q92769 488 aaKnown RBP6.48□□□□□ -1.37
CUL3-211ENST00000487558 LENG9Q96B70 501 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 MCRS1Q96EZ8 462 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 PLEKHG4BQ96PX9 1271 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 IKZF4Q9H2S9 585 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 MGAT4CQ9UBM8 478 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 SWAP70Q9UH65 585 aa6.48□□□□□ -1.37
CUL3-211ENST00000487558 CENPVL1A0A0U1RR11 272 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 PIPSLA2A3N6 862 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 FAM90A20PA6NIJ5 464 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 SAC3D1A6NKF1 404 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 SLC38A8A6NNN8 435 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 MPPED1O15442 326 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 LPXNO60711 386 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 CHRM2P08172 466 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 C1SP09871 688 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 EGR2P11161 476 aaPredicted RBP6.47□□□□□ -1.37
CUL3-211ENST00000487558 ZFXP17010 805 aaPredicted RBP6.47□□□□□ -1.37
CUL3-211ENST00000487558 MCM7P33993 719 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 THBS4P35443 961 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 FOLR3P41439 243 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 CCR5P51681 352 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 BLOC1S1P78537 153 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.47□□□□□ -1.37
CUL3-211ENST00000487558 NBPF8Q3BBV2 869 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 TBC1D25Q3MII6 688 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 ANKRD40Q6AI12 368 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 GRHL2Q6ISB3 625 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 MTHFD1LQ6UB35 978 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 PARS2Q7L3T8 475 aaKnown RBP6.47□□□□□ -1.37
CUL3-211ENST00000487558 RP9Q8TA86 221 aaKnown RBP6.47□□□□□ -1.37
CUL3-211ENST00000487558 CTHRC1Q96CG8 243 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 WDYHV1Q96HA8 205 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 PBKQ96KB5 322 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 REEP2Q9BRK0 252 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 AIFM2Q9BRQ8 373 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 ABHD16BQ9H3Z7 469 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 NRDE2Q9H7Z3 1164 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 KCNK9Q9NPC2 374 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 SMC4Q9NTJ3 1288 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 ANKFY1Q9P2R3 1169 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 DKK3Q9UBP4 350 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 GABRQQ9UN88 632 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 DNAJC16Q9Y2G8 782 aa6.47□□□□□ -1.37
CUL3-211ENST00000487558 TBC1D3DA0A087WVF3 549 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 TBC1D3IA0A087WXS9 549 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 TBC1D3EA0A087X179 549 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 TBC1D3KA0A087X1G2 549 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 TBC1D3BA6NDS4 549 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 TBC1D3FA6NER0 549 aaPredicted RBP6.46□□□□□ -1.38
CUL3-211ENST00000487558 TBC1D3LB9A6J9 549 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 CES2O00748 559 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 HNRNPRO43390 633 aaKnown RBP6.46□□□□□ -1.38
CUL3-211ENST00000487558 SPRY2O43597 315 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 TMPRSS11DO60235 418 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 IFIT1P09914 478 aaKnown RBP6.46□□□□□ -1.38
CUL3-211ENST00000487558 TBC1D3HP0C7X1 549 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 LIFRP42702 1097 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 RNASELQ05823 741 aaKnown RBP6.46□□□□□ -1.38
CUL3-211ENST00000487558 PDCLQ13371 301 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 DNASE1L3Q13609 305 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 SMN1Q16637 294 aaKnown RBP6.46□□□□□ -1.38
CUL3-211ENST00000487558 ATG16L1Q676U5 607 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 TBC1D3GQ6DHY5 549 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 TBC1D3CQ6IPX1 549 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.46□□□□□ -1.38
CUL3-211ENST00000487558 TBC1D3Q8IZP1 549 aaPredicted RBP6.46□□□□□ -1.38
CUL3-211ENST00000487558 ASB10Q8WXI3 467 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 KTI12Q96EK9 354 aaPredicted RBP6.46□□□□□ -1.38
CUL3-211ENST00000487558 Q96MF0 132 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 PRR25Q96S07 402 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 CINPQ9BW66 212 aaPredicted RBP6.46□□□□□ -1.38
CUL3-211ENST00000487558 GPR63Q9BZJ6 419 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 IRAK4Q9NWZ3 460 aa6.46□□□□□ -1.38
CUL3-211ENST00000487558 WDR27A2RRH5 827 aa6.45□□□□□ -1.38
CUL3-211ENST00000487558 MBD3L5A6NJ08 208 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms