RNA–Protein interactions for RNA: ENST00000487547.1

USP34-216, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 612 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-216ENST00000487547 GLMPQ8WWB7 406 aa6.92□□□□□ -1.3
USP34-216ENST00000487547 CUL5Q93034 780 aa6.92□□□□□ -1.3
USP34-216ENST00000487547 TTLL2Q9BWV7 592 aa6.92□□□□□ -1.3
USP34-216ENST00000487547 QTRT1Q9BXR0 403 aaKnown RBP6.92□□□□□ -1.3
USP34-216ENST00000487547 ABHD10Q9NUJ1 306 aa6.92□□□□□ -1.3
USP34-216ENST00000487547 FBXO28Q9NVF7 368 aa6.92□□□□□ -1.3
USP34-216ENST00000487547 MAGED2Q9UNF1 606 aaPredicted RBP6.92□□□□□ -1.3
USP34-216ENST00000487547 SIRT4Q9Y6E7 314 aaPredicted RBP6.92□□□□□ -1.3
USP34-216ENST00000487547 PCSK5Q92824 1860 aa6.92□□□□□ -1.3
USP34-216ENST00000487547 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.91□□□□□ -1.3
USP34-216ENST00000487547 DNAJC9-AS1A6NH13 148 aa6.91□□□□□ -1.3
USP34-216ENST00000487547 CTIFO43310 598 aaKnown RBP6.91□□□□□ -1.3
USP34-216ENST00000487547 MBPP02686 304 aaPredicted RBP6.91□□□□□ -1.3
USP34-216ENST00000487547 CD63P08962 238 aa6.91□□□□□ -1.3
USP34-216ENST00000487547 SLC14A1Q13336 389 aa6.91□□□□□ -1.3
USP34-216ENST00000487547 TRIP6Q15654 476 aaKnown RBP6.91□□□□□ -1.3
USP34-216ENST00000487547 PIK3AP1Q6ZUJ8 805 aa6.91□□□□□ -1.3
USP34-216ENST00000487547 UBE2Q1Q7Z7E8 422 aa6.91□□□□□ -1.3
USP34-216ENST00000487547 NRSN1Q8IZ57 195 aa6.91□□□□□ -1.3
USP34-216ENST00000487547 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.91□□□□□ -1.3
USP34-216ENST00000487547 P2RY11Q96G91 374 aa6.91□□□□□ -1.3
USP34-216ENST00000487547 PRR11Q96HE9 360 aaPredicted RBP6.91□□□□□ -1.3
USP34-216ENST00000487547 PAAF1Q9BRP4 392 aa6.91□□□□□ -1.3
USP34-216ENST00000487547 SLC29A3Q9BZD2 475 aa6.91□□□□□ -1.3
USP34-216ENST00000487547 ARL8BQ9NVJ2 186 aa6.91□□□□□ -1.3
USP34-216ENST00000487547 SLC52A1Q9NWF4 448 aa6.91□□□□□ -1.3
USP34-216ENST00000487547 BTBD3Q9Y2F9 522 aa6.91□□□□□ -1.3
USP34-216ENST00000487547 UBE2J1Q9Y385 318 aaPredicted RBP6.91□□□□□ -1.3
USP34-216ENST00000487547 HEMK1Q9Y5R4 338 aaPredicted RBP6.91□□□□□ -1.3
USP34-216ENST00000487547 J3KTA2 159 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 NPC1O15118 1278 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 BCAR3O75815 825 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 NPPBP16860 134 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 ALDH18A1P54886 795 aaKnown RBP6.9□□□□□ -1.3
USP34-216ENST00000487547 POLE2P56282 527 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 RAE1P78406 368 aaKnown RBP6.9□□□□□ -1.3
USP34-216ENST00000487547 ZNF626Q68DY1 528 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 GATAD2AQ86YP4 633 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 CNGA4Q8IV77 575 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 ZNF527Q8NB42 609 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 PRSS3P2Q8NHM4 247 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 BCAS4Q8TDM0 211 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 AKAP1Q92667 903 aaKnown RBP eCLIP6.9□□□□□ -1.3
USP34-216ENST00000487547 RSC1A1Q92681 617 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 MAP4K1Q92918 833 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 FAR2Q96K12 515 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 SENP7Q9BQF6 1050 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 SH2D3AQ9BRG2 576 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 VPS4AQ9UN37 437 aa6.9□□□□□ -1.3
USP34-216ENST00000487547 DHHO43323 396 aa6.89□□□□□ -1.31
USP34-216ENST00000487547 ANXA6P08133 673 aa6.89□□□□□ -1.31
USP34-216ENST00000487547 ATP5F1P24539 256 aaPredicted RBP6.89□□□□□ -1.31
USP34-216ENST00000487547 HOXD12P35452 270 aa6.89□□□□□ -1.31
USP34-216ENST00000487547 KRTAP1-1Q07627 177 aa6.89□□□□□ -1.31
USP34-216ENST00000487547 MORC3Q14149 939 aa6.89□□□□□ -1.31
USP34-216ENST00000487547 XRRA1Q6P2D8 792 aa6.89□□□□□ -1.31
USP34-216ENST00000487547 UEVLDQ8IX04 471 aa6.89□□□□□ -1.31
USP34-216ENST00000487547 RPL36ALQ969Q0 106 aaKnown RBP6.89□□□□□ -1.31
USP34-216ENST00000487547 PRPF18Q99633 342 aaKnown RBP6.89□□□□□ -1.31
USP34-216ENST00000487547 PDGFCQ9NRA1 345 aa6.89□□□□□ -1.31
USP34-216ENST00000487547 PCDHB2Q9Y5E7 798 aa6.89□□□□□ -1.31
USP34-216ENST00000487547 CCDC187A0A096LP49 1063 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 WDR91A4D1P6 747 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 KCNU1A8MYU2 1149 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 FCHO1O14526 889 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 PIP5K1BO14986 540 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 MMP13P45452 471 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 TNFAIP2Q03169 654 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 OS9Q13438 667 aaPredicted RBP6.88□□□□□ -1.31
USP34-216ENST00000487547 ELF2Q15723 593 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 SUPT20HL1Q3ZLR7 823 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 AWAT1Q58HT5 328 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 MYLK4Q86YV6 388 aaPredicted RBP6.88□□□□□ -1.31
USP34-216ENST00000487547 DENND1AQ8TEH3 1009 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 PIGOQ8TEQ8 1089 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 TMEM79Q9BSE2 394 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 WDR12Q9GZL7 423 aaKnown RBP6.88□□□□□ -1.31
USP34-216ENST00000487547 CDCP1Q9H5V8 836 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 ZNF70Q9UC06 446 aaPredicted RBP6.88□□□□□ -1.31
USP34-216ENST00000487547 CDC23Q9UJX2 597 aa6.88□□□□□ -1.31
USP34-216ENST00000487547 SPATA31A5Q5VU36 1347 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 SPATA31A7Q8IWB4 1347 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 ABHD14A-ACY1A0A1B0GW23 586 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 GXYLT2A0PJZ3 443 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 TAF5LO75529 589 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 SKAP2O75563 359 aaPredicted RBP6.87□□□□□ -1.31
USP34-216ENST00000487547 ITGA5P08648 1049 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 SLC8A1P32418 973 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 PTK2BQ14289 1009 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 SPARCL1Q14515 664 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 KPNB1Q14974 876 aaKnown RBP6.87□□□□□ -1.31
USP34-216ENST00000487547 MSANTD2Q6P1R3 559 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 RINLQ6ZS11 566 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 IPO4Q8TEX9 1081 aaKnown RBP6.87□□□□□ -1.31
USP34-216ENST00000487547 SMG7Q92540 1137 aaKnown RBP6.87□□□□□ -1.31
USP34-216ENST00000487547 ZNF845Q96IR2 970 aaPredicted RBP6.87□□□□□ -1.31
USP34-216ENST00000487547 C1QTNF7Q9BXJ2 289 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 TRIM2Q9C040 744 aa6.87□□□□□ -1.31
USP34-216ENST00000487547 TP63Q9H3D4 680 aaPredicted RBP6.87□□□□□ -1.31
USP34-216ENST00000487547 KCNK9Q9NPC2 374 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms