RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 XPO1O14980 1071 aaKnown RBP27.01■■□□□ 1.91
HLA-C-208ENST00000487245 PEX11AO75192 247 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 GCATO75600 419 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 GNAT1P11488 350 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 TPSB2P20231 275 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 SERPINB4P48594 390 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 ARFIP2P53365 341 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 CDK16Q00536 496 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 TPSAB1Q15661 275 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 OLFML2BQ68BL8 750 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 ZNF449Q6P9G9 518 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 PRPF39Q86UA1 669 aaKnown RBP27.01■■□□□ 1.91
HLA-C-208ENST00000487245 PSTKQ8IV42 348 aaKnown RBP27.01■■□□□ 1.91
HLA-C-208ENST00000487245 ENDOVQ8N8Q3 282 aaKnown RBP27.01■■□□□ 1.91
HLA-C-208ENST00000487245 GPATCH11Q8N954 259 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 CFAP36Q96G28 342 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 FAM111AQ96PZ2 611 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 KLK14Q9P0G3 267 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 GJD2Q9UKL4 321 aa27.01■■□□□ 1.91
HLA-C-208ENST00000487245 SPTLC1O15269 473 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 DIAPH2O60879 1101 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 AVILO75366 819 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 IBSPP21815 317 aaPredicted RBP27■■□□□ 1.91
HLA-C-208ENST00000487245 LMO2P25791 158 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 KRT72Q14CN4 511 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 MTBPQ96DY7 904 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 LPIN3Q9BQK8 851 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 PLAC1Q9HBJ0 212 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 RCOR3Q9P2K3 495 aaPredicted RBP27■■□□□ 1.91
HLA-C-208ENST00000487245 TRIM49D1C9J1S8 452 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 COPEO14579 308 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 TREHO43280 583 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 HAUS5O94927 633 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 MYL3P08590 195 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 GNAZP19086 355 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 CALB2P22676 271 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 HIC1Q14526 733 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 BZW1Q7L1Q6 419 aaKnown RBP27■■□□□ 1.91
HLA-C-208ENST00000487245 ADGRF2Q8IZF7 708 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 SLC2A14Q8TDB8 520 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 TMEM40Q8WWA1 233 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 PTCD3Q96EY7 689 aaKnown RBP27■■□□□ 1.91
HLA-C-208ENST00000487245 HNRNPABQ99729 332 aaKnown RBP27■■□□□ 1.91
HLA-C-208ENST00000487245 BATF3Q9NR55 127 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 DCTN4Q9UJW0 460 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 NUMBLQ9Y6R0 609 aa27■■□□□ 1.91
HLA-C-208ENST00000487245 C17orf102A2RUQ5 167 aa26.99■■□□□ 1.91
HLA-C-208ENST00000487245 APOEP02649 317 aa26.99■■□□□ 1.91
HLA-C-208ENST00000487245 DLDP09622 509 aaKnown RBP26.99■■□□□ 1.91
HLA-C-208ENST00000487245 CDK18Q07002 472 aa26.99■■□□□ 1.91
HLA-C-208ENST00000487245 OVGP1Q12889 678 aa26.99■■□□□ 1.91
HLA-C-208ENST00000487245 CLEC4CQ8WTT0 213 aa26.99■■□□□ 1.91
HLA-C-208ENST00000487245 SRPK1Q96SB4 655 aaKnown RBP26.99■■□□□ 1.91
HLA-C-208ENST00000487245 HEY2Q9UBP5 337 aa26.99■■□□□ 1.91
HLA-C-208ENST00000487245 CPA4Q9UI42 421 aa26.99■■□□□ 1.91
HLA-C-208ENST00000487245 HACD1B0YJ81 288 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 CCDC22O60826 627 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 EPHB2P29323 1055 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 LRPAP1P30533 357 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 MATKP42679 507 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 CRYMQ14894 314 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 VPS52Q8N1B4 723 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 PPM1NQ8N819 430 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.98■■□□□ 1.91
HLA-C-208ENST00000487245 QKIQ96PU8 341 aaKnown RBP eCLIP26.98■■□□□ 1.91
HLA-C-208ENST00000487245 RNF39Q9H2S5 420 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 PLLPQ9Y342 182 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 IPPQ9Y573 584 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 TFE3P19532 575 aaPredicted RBP26.98■■□□□ 1.91
HLA-C-208ENST00000487245 BGNP21810 368 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 CLNS1AP54105 237 aaKnown RBP26.98■■□□□ 1.91
HLA-C-208ENST00000487245 CYS1Q717R9 158 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 RAB3IL1Q8TBN0 382 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 TTC17Q96AE7 1141 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 NSL1Q96IY1 281 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 CSPG4P5Q96PW8 444 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 KCTD15Q96SI1 283 aaPredicted RBP26.98■■□□□ 1.91
HLA-C-208ENST00000487245 TMEM120AQ9BXJ8 343 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 DUSP16Q9BY84 665 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 MTMR10Q9NXD2 777 aa26.98■■□□□ 1.91
HLA-C-208ENST00000487245 HCRTO43612 131 aa26.97■■□□□ 1.91
HLA-C-208ENST00000487245 LMNAP02545 664 aaKnown RBP26.97■■□□□ 1.91
HLA-C-208ENST00000487245 RPSAP08865 295 aaKnown RBP26.97■■□□□ 1.91
HLA-C-208ENST00000487245 ARL4AP40617 200 aa26.97■■□□□ 1.91
HLA-C-208ENST00000487245 LILRA4P59901 499 aa26.97■■□□□ 1.91
HLA-C-208ENST00000487245 SLC25A52Q3SY17 297 aa26.97■■□□□ 1.91
HLA-C-208ENST00000487245 B3GALNT2Q8NCR0 500 aa26.97■■□□□ 1.91
HLA-C-208ENST00000487245 SIGLEC10Q96LC7 697 aa26.97■■□□□ 1.91
HLA-C-208ENST00000487245 C7orf26Q96N11 449 aa26.97■■□□□ 1.91
HLA-C-208ENST00000487245 ZNF570Q96NI8 536 aa26.97■■□□□ 1.91
HLA-C-208ENST00000487245 IQCGQ9H095 443 aaKnown RBP26.97■■□□□ 1.91
HLA-C-208ENST00000487245 A0A0G2JND7 137 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 FAM159BA6NKW6 160 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 CXorf49A8MYA2 514 aaPredicted RBP26.96■■□□□ 1.91
HLA-C-208ENST00000487245 DAB1O75553 588 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 RFPL1O75677 317 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 CELF2O95319 508 aaKnown RBP26.96■■□□□ 1.91
HLA-C-208ENST00000487245 SOX4Q06945 474 aaPredicted RBP26.96■■□□□ 1.91
HLA-C-208ENST00000487245 ANKRD20A2Q5SQ80 823 aa26.96■■□□□ 1.91
HLA-C-208ENST00000487245 ANKRD20A1Q5TYW2 823 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms