RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 BAIAP3O94812 1187 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 UFL1O94874 794 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 APOEP02649 317 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 APRTP07741 180 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 UNGP13051 313 aaPredicted RBP6.43□□□□□ -1.38
VPS13D-209ENST00000487188 UGT1A6P19224 532 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 UGT1A1P22309 533 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 UGT1A4P22310 534 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 JAK1P23458 1154 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 EEF1B2P24534 225 aaKnown RBP6.43□□□□□ -1.38
VPS13D-209ENST00000487188 UGT1A3P35503 534 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 UGT1A5P35504 534 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 NEK2P51955 445 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 RPL7AP62424 266 aaKnown RBP6.43□□□□□ -1.38
VPS13D-209ENST00000487188 OCA2Q04671 838 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 KLF10Q13118 480 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 DMP1Q13316 513 aaPredicted RBP6.43□□□□□ -1.38
VPS13D-209ENST00000487188 APOFQ13790 326 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 KCNT1Q5JUK3 1230 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 GPR107Q5VW38 600 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 BSPRYQ5W0U4 402 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 SV2AQ7L0J3 742 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 MON1BQ7L1V2 547 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 SLC15A3Q8IY34 581 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 SIX6OS1Q8N1H7 587 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 MYO1HQ8N1T3 1032 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 TMCO5AQ8N6Q1 288 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 NAT8LQ8N9F0 302 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 CXorf38Q8TB03 319 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 SPATA18Q8TC71 538 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 MZB1Q8WU39 189 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 APBB2Q92870 758 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 C12orf43Q96C57 262 aaKnown RBP6.43□□□□□ -1.38
VPS13D-209ENST00000487188 ITPKCQ96DU7 683 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 PKP2Q99959 881 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 HEPHQ9BQS7 1158 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 SLC4A5Q9BY07 1137 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 UGT1A7Q9HAW7 530 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 UGT1A10Q9HAW8 530 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 UGT1A8Q9HAW9 530 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 MAN1C1Q9NR34 630 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 SIRPGQ9P1W8 387 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 SEPT3Q9UH03 358 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 PCDHGB4Q9UN71 923 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 TMA7Q9Y2S6 64 aaKnown RBP6.43□□□□□ -1.38
VPS13D-209ENST00000487188 TMEM98Q9Y2Y6 226 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 PCDHGB5Q9Y5G0 923 aa6.43□□□□□ -1.38
VPS13D-209ENST00000487188 KIAA1551Q9HCM1 1747 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 A0A0B4J269 797 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 J3QRK9 145 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 MEIS2O14770 477 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 CSDE1O75534 798 aaKnown RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 TCF4P15884 667 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 CDKL1Q00532 357 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 TRAF2Q12933 501 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 PIGHQ14442 188 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 ZNF829Q3KNS6 432 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 XKR9Q5GH70 373 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 NIPAL1Q6NVV3 410 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 SLC2A7Q6PXP3 512 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 XKR5Q6UX68 686 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 PTAR1Q7Z6K3 402 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 FAM47BQ8NA70 645 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 FBXL8Q96CD0 374 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 ISOC1Q96CN7 298 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 FAM163AQ96GL9 167 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 FAM213AQ9BRX8 229 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 UPF3AQ9H1J1 476 aaKnown RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 C17orf75Q9HAS0 396 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 PARVBQ9HBI1 364 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 CNTN3Q9P232 1028 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 ATP11BQ9Y2G3 1177 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 CLASP2O75122 1294 aaKnown RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 AVILO75366 819 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 OXSR1O95747 527 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 SNHG28P0DPA3 235 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 RALBP11234 206 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 CD19P15391 556 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 XRCC1P18887 633 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 GRK2P25098 689 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 GARSP41250 739 aaKnown RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 IDH3AP50213 366 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 THOP1P52888 689 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 GCNT1Q02742 428 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 C1QBPQ07021 282 aaKnown RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 DPYSL3Q14195 570 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 ABCB5Q2M3G0 1257 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 PGM2L1Q6PCE3 622 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 SETD3Q86TU7 594 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 UNC45BQ8IWX7 931 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 TERB1Q8NA31 727 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 TNIP2Q8NFZ5 429 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 DCAF4Q8WV16 495 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 TFB1MQ8WVM0 346 aaKnown RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 DDX1Q92499 740 aaKnown RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 FAM84AQ96KN4 292 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 NLRP4Q96MN2 994 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 PPP1R10Q96QC0 940 aaKnown RBP6.42□□□□□ -1.38
VPS13D-209ENST00000487188 HSD17B14Q9BPX1 270 aa6.42□□□□□ -1.38
VPS13D-209ENST00000487188 TCF7L2Q9NQB0 619 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms