RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	WDTC1	Q8N5D0	677 aa		13.7	□□□□□ -0.22
NR1H3-223	ENST00000486991	TTC16	Q8NEE8	873 aa		13.7	□□□□□ -0.22
NR1H3-223	ENST00000486991	SLC30A5	Q8TAD4	765 aa		13.7	□□□□□ -0.22
NR1H3-223	ENST00000486991	CPA5	Q8WXQ8	436 aa		13.7	□□□□□ -0.22
NR1H3-223	ENST00000486991	CYP2S1	Q96SQ9	504 aa		13.7	□□□□□ -0.22
NR1H3-223	ENST00000486991	CSNK1G1	Q9HCP0	422 aa		13.7	□□□□□ -0.22
NR1H3-223	ENST00000486991	ST7	Q9NRC1	585 aa		13.7	□□□□□ -0.22
NR1H3-223	ENST00000486991	TDP1	Q9NUW8	608 aa		13.7	□□□□□ -0.22
NR1H3-223	ENST00000486991	CYTH4	Q9UIA0	394 aa		13.7	□□□□□ -0.22
NR1H3-223	ENST00000486991	EML5	Q05BV3	1969 aa		13.7	□□□□□ -0.22
NR1H3-223	ENST00000486991	CACNA1B	Q00975	2339 aa		13.7	□□□□□ -0.22
NR1H3-223	ENST00000486991	ZFHX4	Q86UP3	3567 aa		13.7	□□□□□ -0.22
NR1H3-223	ENST00000486991	TRAV19	A0A0A6YYK7	116 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	FAM92A	A1XBS5	289 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	ZNF840P	A6NDX5	716 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	XPO1	O14980	1071 aa	Known RBP	13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	LRP3	O75074	770 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	OAS1	P00973	400 aa	Known RBP	13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	EGF	P01133	1207 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	USP17L7	P0C7H9	530 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	TCF3	P15923	654 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	CDH5	P33151	784 aa	Predicted RBP	13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	NSF	P46459	744 aa	Known RBP	13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	PGF	P49763	221 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	CCZ1B	P86790	482 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	CCZ1	P86791	482 aa	Predicted RBP	13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	RUNX3	Q13761	415 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	SLC18A3	Q16572	532 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	CCDC122	Q5T0U0	273 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	ACAD10	Q6JQN1	1059 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	PMF1	Q6P1K2	205 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	GPRIN1	Q7Z2K8	1008 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	PIGZ	Q86VD9	579 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	DNAAF5	Q86Y56	855 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	SCAMP5	Q8TAC9	235 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	NOX5	Q96PH1	765 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	SYNC	Q9H7C4	482 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	TAS2R14	Q9NYV8	317 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	FRY	Q5TBA9	3013 aa		13.69	□□□□□ -0.22
NR1H3-223	ENST00000486991	ANTXRL	A6NF34	631 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	HHLA1	C9JL84	531 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	PIK3R2	O00459	728 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	ARHGAP6	O43182	974 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	RTN2	O75298	545 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	NDUFA10	O95299	355 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	IPO7	O95373	1038 aa	Known RBP	13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	ZDHHC11B	P0C7U3	371 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	UNG	P13051	313 aa	Predicted RBP	13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	CNR2	P34972	360 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	PLA2G4A	P47712	749 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	TAF10	Q12962	218 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	PDCL	Q13371	301 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	TMEM196	Q5HYL7	178 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	ALKBH5	Q6P6C2	394 aa	Known RBP	13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	ERICH1	Q86X53	443 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	MSANTD4	Q8NCY6	345 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	SLC35F5	Q8WV83	523 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	PPP1R13B	Q96KQ4	1090 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	ZFR	Q96KR1	1074 aa	Known RBP	13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	C11orf70	Q9BRQ4	267 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	RNF38	Q9H0F5	515 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	KCNF1	Q9H3M0	494 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	LRRC4	Q9HBW1	653 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	TRPC7	Q9HCX4	862 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	TRPM5	Q9NZQ8	1165 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	NAGPA	Q9UK23	515 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	ARHGAP26	Q9UNA1	814 aa		13.68	□□□□□ -0.22
NR1H3-223	ENST00000486991	MAP1B	P46821	2468 aa	Known RBP	13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	EIF3CL	B5ME19	914 aa	Known RBP	13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	DCLK1	O15075	740 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	RNF40	O75150	1001 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	RPP40	O75818	363 aa	Known RBP	13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	FTL	P02792	175 aa	Predicted RBP	13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	CKM	P06732	381 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	GZMA	P12544	262 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	LCP1	P13796	627 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	GALK1	P51570	392 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	SLC5A3	P53794	718 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	SLC7A9	P82251	487 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	CENPC	Q03188	943 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	IFRD2	Q12894	506 aa	Predicted RBP	13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	NR1H3	Q13133	447 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	PDGFRL	Q15198	375 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	SPA17	Q15506	151 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	PTPN20	Q4JDL3	420 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	AASDH	Q4L235	1098 aa	Predicted RBP	13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	C2CD6	Q53TS8	623 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	PPP1R2P3	Q6NXS1	205 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	MMS22L	Q6ZRQ5	1243 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	NUP93	Q8N1F7	819 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	SYNPO	Q8N3V7	929 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	PDZD8	Q8NEN9	1154 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	IPO4	Q8TEX9	1081 aa	Known RBP	13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	STK32A	Q8WU08	396 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	GAB3	Q8WWW8	586 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	EZH1	Q92800	747 aa	Predicted RBP	13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	HSFY1	Q96LI6	401 aa		13.67	□□□□□ -0.22
NR1H3-223	ENST00000486991	SLITRK1	Q96PX8	696 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms