RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 PNMA8BQ9ULN7 279 aaPredicted RBP5.81□□□□□ -1.48
COPS3-209ENST00000486810 ABCC11Q96J66 1382 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 CTTNBP2Q8WZ74 1663 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 LRRIQ3A6PVS8 624 aaPredicted RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 RASA4BC9J798 803 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 E9PMD0 336 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 FIBPO43427 364 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 TSPAN6O43657 245 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 GPANK1O95872 356 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 FTLP02792 175 aaPredicted RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 RPLP2P05387 115 aaKnown RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 VIMP08670 466 aaKnown RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 LPOP22079 712 aaPredicted RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 GNALP38405 381 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 ACADSBP45954 432 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 MCM2P49736 904 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 GPC3P51654 580 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 BLVRAP53004 296 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 HSD17B7P56937 341 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 GEMIN4P57678 1058 aaKnown RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 CXADRP78310 365 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 NKX6-1P78426 367 aaPredicted RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 RELQ04864 619 aaPredicted RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 KIF5AQ12840 1032 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 DRP2Q13474 957 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 ITGA7Q13683 1181 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 CYP2A13Q16696 494 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 NDUFA5Q16718 116 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 KRT71Q3SY84 523 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 CAVIN4Q5BKX8 364 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 WDR45BQ5MNZ6 344 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 TWF2Q6IBS0 349 aaKnown RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 ABRAXAS1Q6UWZ7 409 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 EPM2AIP1Q7L775 607 aaPredicted RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 CATSPER4Q7RTX7 472 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 HEATR3Q7Z4Q2 680 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 YTHDF3Q7Z739 585 aaKnown RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 GPR149Q86SP6 731 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 OPTNQ96CV9 577 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 HNRNPABQ99729 332 aaKnown RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 TTPALQ9BTX7 342 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 MOV10L1Q9BXT6 1211 aaKnown RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 PACSIN1Q9BY11 444 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 PUS3Q9BZE2 481 aaKnown RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 SMARCAD1Q9H4L7 1026 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 KLC4Q9NSK0 619 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 TMEM74BQ9NUR3 256 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 PIH1D1Q9NWS0 290 aaKnown RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 AATFQ9NY61 560 aaKnown RBP eCLIP5.8□□□□□ -1.48
COPS3-209ENST00000486810 CTTNBP2NLQ9P2B4 639 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 WDR35Q9P2L0 1181 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 PA2G4Q9UQ80 394 aaKnown RBP5.8□□□□□ -1.48
COPS3-209ENST00000486810 EXOC6BQ9Y2D4 811 aa5.8□□□□□ -1.48
COPS3-209ENST00000486810 ERICH3Q5RHP9 1530 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 KIF7Q2M1P5 1343 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 A6NNZ2 444 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 AKR1B15C9JRZ8 316 aaPredicted RBP5.79□□□□□ -1.48
COPS3-209ENST00000486810 SLC16A6O15403 523 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 YKT6O15498 198 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 ZSCAN12O43309 604 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 KLHL41O60662 606 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 DTNBO60941 627 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 RASSF9O75901 435 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 EGR2P11161 476 aaPredicted RBP5.79□□□□□ -1.48
COPS3-209ENST00000486810 SCG2P13521 617 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 TYRP14679 529 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 PRKAR1BP31321 381 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 MLH1P40692 756 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 UBA7P41226 1012 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 RARSP54136 660 aaKnown RBP5.79□□□□□ -1.48
COPS3-209ENST00000486810 NLRP5P59047 1200 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 PDE1BQ01064 536 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 RUNX1T1Q06455 604 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 BNIP1Q12981 228 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 BLMHQ13867 455 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 C15orf59Q2T9L4 293 aaPredicted RBP5.79□□□□□ -1.48
COPS3-209ENST00000486810 TUBB8Q3ZCM7 444 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 IFIT1BQ5T764 474 aaKnown RBP5.79□□□□□ -1.48
COPS3-209ENST00000486810 C8orf74Q6P047 294 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 PLBD1Q6P4A8 553 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 BZW1Q7L1Q6 419 aaKnown RBP5.79□□□□□ -1.48
COPS3-209ENST00000486810 C14orf80Q86SX3 495 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 PPP1R3BQ86XI6 285 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 SPATA2LQ8IUW3 424 aaPredicted RBP5.79□□□□□ -1.48
COPS3-209ENST00000486810 CCDC13Q8IYE1 715 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 GRAMD1CQ8IYS0 662 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 ZNF713Q8N859 430 aaPredicted RBP5.79□□□□□ -1.48
COPS3-209ENST00000486810 PLBD2Q8NHP8 589 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 IFT81Q8WYA0 676 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 SKA1Q96BD8 255 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 C16orf45Q96MC5 204 aaPredicted RBP5.79□□□□□ -1.48
COPS3-209ENST00000486810 AIFM3Q96NN9 605 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 MTMR9Q96QG7 549 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 PNKPQ96T60 521 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 ALOXE3Q9BYJ1 711 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 TRIM5Q9C035 493 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 REXO4Q9GZR2 422 aaKnown RBP5.79□□□□□ -1.48
COPS3-209ENST00000486810 BICC1Q9H694 974 aaKnown RBP5.79□□□□□ -1.48
COPS3-209ENST00000486810 PARVBQ9HBI1 364 aa5.79□□□□□ -1.48
COPS3-209ENST00000486810 MRPS18AQ9NVS2 196 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms