RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 FPR3P25089 353 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 KLRK1P26718 216 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 ITPKBP27987 946 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 AKT1P31749 480 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 BFSP2Q13515 415 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 ZRSR2Q15696 482 aaKnown RBP6.92□□□□□ -1.3
RTN4-214ENST00000486085 TRIM71Q2Q1W2 868 aaKnown RBP6.92□□□□□ -1.3
RTN4-214ENST00000486085 RINT1Q6NUQ1 792 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 MTHFD1LQ6UB35 978 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 SIMC1Q8NDZ2 872 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 NGDNQ8NEJ9 315 aaKnown RBP6.92□□□□□ -1.3
RTN4-214ENST00000486085 OR1N1Q8NGS0 311 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 EID2BQ96D98 161 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 NUDT22Q9BRQ3 303 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 PAGR1Q9BTK6 254 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 KATNAL1Q9BW62 490 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 CPNE5Q9HCH3 593 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 ALG13Q9NP73 1137 aaKnown RBP6.92□□□□□ -1.3
RTN4-214ENST00000486085 SLC17A6Q9P2U8 582 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 DMRT1Q9Y5R6 373 aa6.92□□□□□ -1.3
RTN4-214ENST00000486085 DENND4BO75064 1496 aaPredicted RBP6.92□□□□□ -1.3
RTN4-214ENST00000486085 SYCP2Q9BX26 1530 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 FRMPD1Q5SYB0 1578 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 BCORL1Q5H9F3 1711 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 LOC102724159A0A0B4J2E5 919 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 MYCLP12524 364 aaPredicted RBP6.91□□□□□ -1.3
RTN4-214ENST00000486085 ADRA1DP25100 572 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 GRK6P43250 576 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 GSTM5P46439 218 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 DIO1P49895 249 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 CACNA2D1P54289 1103 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 TGFB2P61812 414 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 CSHL1Q14406 222 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 PWP2Q15269 919 aaKnown RBP6.91□□□□□ -1.3
RTN4-214ENST00000486085 AASDHQ4L235 1098 aaPredicted RBP6.91□□□□□ -1.3
RTN4-214ENST00000486085 INO80DQ53TQ3 878 aaPredicted RBP6.91□□□□□ -1.3
RTN4-214ENST00000486085 PRR16Q569H4 304 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 SULT6B1Q6IMI4 303 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 NKAPQ8N5F7 415 aaKnown RBP6.91□□□□□ -1.3
RTN4-214ENST00000486085 SPATA5Q8NB90 893 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 PRR11Q96HE9 360 aaPredicted RBP6.91□□□□□ -1.3
RTN4-214ENST00000486085 EIF3CQ99613 913 aaKnown RBP6.91□□□□□ -1.3
RTN4-214ENST00000486085 MACROD1Q9BQ69 325 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 TP63Q9H3D4 680 aaPredicted RBP6.91□□□□□ -1.3
RTN4-214ENST00000486085 AGO4Q9HCK5 861 aaKnown RBP6.91□□□□□ -1.3
RTN4-214ENST00000486085 ASB6Q9NWX5 421 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 HERC5Q9UII4 1024 aaKnown RBP6.91□□□□□ -1.3
RTN4-214ENST00000486085 ENTPD2Q9Y5L3 495 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 SCAPERQ9BY12 1400 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 ZFYVE16Q7Z3T8 1539 aa6.91□□□□□ -1.3
RTN4-214ENST00000486085 FNDC1Q4ZHG4 1894 aaPredicted RBP6.9□□□□□ -1.3
RTN4-214ENST00000486085 POLR2AP24928 1970 aaKnown RBP6.9□□□□□ -1.3
RTN4-214ENST00000486085 DHHO43323 396 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 TMPRSS11DO60235 418 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 SLPIP03973 132 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 HNRNPCP07910 306 aaKnown RBP eCLIP6.9□□□□□ -1.3
RTN4-214ENST00000486085 ITGA2BP08514 1039 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 DGKQP52824 942 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 CYP4F2P78329 520 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 LMAN2Q12907 356 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 DENND2CQ68D51 928 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 KLHL17Q6TDP4 642 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 KIRREL2Q6UWL6 708 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 SLC29A4Q7RTT9 530 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 CCDC117Q8IWD4 279 aaPredicted RBP6.9□□□□□ -1.3
RTN4-214ENST00000486085 NRSN1Q8IZ57 195 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 THAP7Q9BT49 309 aaPredicted RBP6.9□□□□□ -1.3
RTN4-214ENST00000486085 MYLK2Q9H1R3 596 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 IKZF4Q9H2S9 585 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 SNX15Q9NRS6 342 aa6.9□□□□□ -1.3
RTN4-214ENST00000486085 HFM1A2PYH4 1435 aa6.9□□□□□ -1.31
RTN4-214ENST00000486085 NCOA1Q15788 1441 aa6.9□□□□□ -1.31
RTN4-214ENST00000486085 FAM135AQ9P2D6 1515 aa6.9□□□□□ -1.31
RTN4-214ENST00000486085 ADGBQ8N7X0 1667 aa6.9□□□□□ -1.31
RTN4-214ENST00000486085 KAT6AQ92794 2004 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 SUV39H1O43463 412 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 EXOC3O60645 756 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 ZNF37AP17032 561 aaPredicted RBP6.89□□□□□ -1.31
RTN4-214ENST00000486085 COPB1P53618 953 aaKnown RBP6.89□□□□□ -1.31
RTN4-214ENST00000486085 SEMA3BQ13214 749 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 KCNJ12Q14500 433 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 TIGD6Q17RP2 521 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 RNASE12Q5GAN4 147 aaKnown RBP6.89□□□□□ -1.31
RTN4-214ENST00000486085 LIN54Q6MZP7 749 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 CCDC144NLQ6NUI1 221 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 PCSK4Q6UW60 755 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 PIK3AP1Q6ZUJ8 805 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 ZNF804AQ7Z570 1209 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 AMIGO2Q86SJ2 522 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 SFTPA1Q8IWL2 248 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 WDR60Q8WVS4 1066 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 TRAPPC12Q8WVT3 735 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 TBC1D5Q92609 795 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 CHFRQ96EP1 664 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 UROC1Q96N76 676 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 CIPCQ9C0C6 399 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 KLK15Q9H2R5 256 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 SYNPO2LQ9H987 977 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 SAP30LQ9HAJ7 183 aa6.89□□□□□ -1.31
RTN4-214ENST00000486085 MLXIPQ9HAP2 919 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms