RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 CACNA2D1P54289 1103 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 PSMC1P62191 440 aaKnown RBP10.38□□□□□ -0.75
SND1-213ENST00000486037 ANO4Q32M45 955 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 GRAMD4Q6IC98 578 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 METTL3Q86U44 580 aaKnown RBP10.38□□□□□ -0.75
SND1-213ENST00000486037 FAM124AQ86V42 546 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 SPATA2LQ8IUW3 424 aaPredicted RBP10.38□□□□□ -0.75
SND1-213ENST00000486037 KIAA1958Q8N8K9 716 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 SNX19Q92543 992 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 IGSF8Q969P0 613 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 MYLPFQ96A32 169 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 MED8Q96G25 268 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 CNDP2Q96KP4 475 aaKnown RBP10.38□□□□□ -0.75
SND1-213ENST00000486037 MSTO1Q9BUK6 570 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 TTLL2Q9BWV7 592 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 GTPBP4Q9BZE4 634 aaKnown RBP10.38□□□□□ -0.75
SND1-213ENST00000486037 IKZF4Q9H2S9 585 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 C17orf75Q9HAS0 396 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 TM9SF3Q9HD45 589 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 TMEM30AQ9NV96 361 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 ANKMY1Q9P2S6 941 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 RWDD2AQ9UIY3 292 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 ODF2LQ9ULJ1 636 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 DERAQ9Y315 318 aa10.38□□□□□ -0.75
SND1-213ENST00000486037 TRIM49BA6NDI0 452 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 ANKRD63C9JTQ0 380 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 ZBTB24O43167 697 aaPredicted RBP10.37□□□□□ -0.75
SND1-213ENST00000486037 COCHO43405 550 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 PFKLP17858 780 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 BDNFP23560 247 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 ACTN2P35609 894 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 CTSKP43235 329 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 MAGEA11P43364 429 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 PDE6CP51160 858 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 AFF3P51826 1226 aaKnown RBP10.37□□□□□ -0.75
SND1-213ENST00000486037 CASP5P51878 434 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 NCKAP1LP55160 1127 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 TMPRSS3P57727 454 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 TAF10Q12962 218 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 PAK1Q13153 545 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 SHBQ15464 509 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 SV2CQ496J9 727 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 BTBD8Q5XKL5 378 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 SDE2Q6IQ49 451 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 FAM171BQ6P995 826 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 DENND5BQ6ZUT9 1274 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 EPM2AIP1Q7L775 607 aaPredicted RBP10.37□□□□□ -0.75
SND1-213ENST00000486037 CD302Q8IX05 232 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 GUF1Q8N442 669 aaKnown RBP10.37□□□□□ -0.75
SND1-213ENST00000486037 SPDYE1Q8NFV5 336 aaPredicted RBP10.37□□□□□ -0.75
SND1-213ENST00000486037 SCFD1Q8WVM8 642 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 DHTKD1Q96HY7 919 aaPredicted RBP10.37□□□□□ -0.75
SND1-213ENST00000486037 HIC2Q96JB3 615 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 SPATA17Q96L03 361 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 TSPAN18Q96SJ8 248 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 FIZ1Q96SL8 496 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 CRTAC1Q9NQ79 661 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 FANCLQ9NW38 375 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 TBC1D14Q9P2M4 693 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 C2CD2Q9Y426 696 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 PCDHB1Q9Y5F3 818 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 STON1Q9Y6Q2 735 aa10.37□□□□□ -0.75
SND1-213ENST00000486037 ANKRD17O75179 2603 aaKnown RBP10.37□□□□□ -0.75
SND1-213ENST00000486037 UTP20O75691 2785 aaKnown RBP10.36□□□□□ -0.75
SND1-213ENST00000486037 NEDD8-MDP1E9PL57 170 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 PSMA7O14818 248 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 HNRNPDLO14979 420 aaKnown RBP10.36□□□□□ -0.75
SND1-213ENST00000486037 PAPSS1O43252 624 aaPredicted RBP10.36□□□□□ -0.75
SND1-213ENST00000486037 GREM1O60565 184 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 LDOC1O95751 146 aaPredicted RBP10.36□□□□□ -0.75
SND1-213ENST00000486037 PIGRP01833 764 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 CISD3P0C7P0 127 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 IRF1P10914 325 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 ATP1A3P13637 1013 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 ZNF18P17022 549 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 LMO2P25791 158 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 POLR2BP30876 1174 aaKnown RBP10.36□□□□□ -0.75
SND1-213ENST00000486037 HOXD13P35453 343 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 PPP1R2P41236 205 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 COPAP53621 1224 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 IFRD2Q12894 506 aaPredicted RBP10.36□□□□□ -0.75
SND1-213ENST00000486037 NFATC3Q12968 1075 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 STIM1Q13586 685 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 TTI2Q6NXR4 508 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 CRELD2Q6UXH1 353 aaPredicted RBP10.36□□□□□ -0.75
SND1-213ENST00000486037 MYCT1Q8N699 235 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 EXD3Q8N9H8 876 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 ZSWIM2Q8NEG5 633 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 CXorf38Q8TB03 319 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 FUBP3Q96I24 572 aaKnown RBP eCLIP10.36□□□□□ -0.75
SND1-213ENST00000486037 DUSP9Q99956 384 aaKnown RBP10.36□□□□□ -0.75
SND1-213ENST00000486037 ORAI3Q9BRQ5 295 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 TIPINQ9BVW5 301 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 PARVGQ9HBI0 331 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 OLFML3Q9NRN5 406 aa10.36□□□□□ -0.75
SND1-213ENST00000486037 SAMSN1Q9NSI8 373 aaKnown RBP10.36□□□□□ -0.75
SND1-213ENST00000486037 LRRK2Q5S007 2527 aa10.35□□□□□ -0.75
SND1-213ENST00000486037 A0A1B0GTQ1 180 aa10.35□□□□□ -0.75
SND1-213ENST00000486037 F8VP50 259 aa10.35□□□□□ -0.75
SND1-213ENST00000486037 GABRDO14764 452 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms