RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 LATS1O95835 1130 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 EGFP01133 1207 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 IGLV3-27P01718 113 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 CYBBP04839 570 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 TYRP14679 529 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 GABRB2P47870 512 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 CXCL12P48061 93 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 SLC6A11P48066 632 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 SLC11A2P49281 568 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 CCR3P51677 355 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 NOMO3P69849 1222 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 FMO1Q01740 532 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 RING1Q06587 406 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 NNTQ13423 1086 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 PPP2R5DQ14738 602 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 DCAF6Q58WW2 860 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 SYPL2Q5VXT5 272 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 NUGGCQ68CJ6 796 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 OLFML1Q6UWY5 402 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 TPGS1Q6ZTW0 290 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 NUDT18Q6ZVK8 323 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 FAM183BPQ6ZVS7 135 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 SLC26A9Q7LBE3 791 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 NAT16Q8N8M0 369 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 CPA5Q8WXQ8 436 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 BAP1Q92560 729 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 SLC2A13Q96QE2 648 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 XPO6Q96QU8 1125 aaKnown RBP12.97□□□□□ -0.33
HMG20B-211ENST00000486028 NUP58Q9BVL2 599 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 MARK1Q9P0L2 795 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 DEC1Q9P2X7 70 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 TLR6Q9Y2C9 796 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 MIA3Q5JRA6 1907 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 CACNA1IQ9P0X4 2223 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 WDFY4Q6ZS81 3184 aa12.97□□□□□ -0.33
HMG20B-211ENST00000486028 TULP3O75386 442 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 KAT7O95251 611 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 CYP1A1P04798 512 aaPredicted RBP12.96□□□□□ -0.33
HMG20B-211ENST00000486028 APODP05090 189 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 TPM3P06753 285 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 GBP1P32455 592 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 SCNN1AP37088 669 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 GRIA2P42262 883 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 ZNF445P59923 1031 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 FIGNQ5HY92 759 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 ADGRF1Q5T601 910 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 Q6ZS52 159 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 TAC4Q86UU9 113 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 ETFBKMTQ8IXQ9 262 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 FAM217AQ8IXS0 508 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 DEFB106AQ8N104 65 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 CPXM2Q8N436 756 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 ZNF397Q8NF99 534 aaPredicted RBP12.96□□□□□ -0.33
HMG20B-211ENST00000486028 ADAM32Q8TC27 787 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 ATOH1Q92858 354 aaPredicted RBP12.96□□□□□ -0.33
HMG20B-211ENST00000486028 AZIN2Q96A70 460 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 PIWIL1Q96J94 861 aaKnown RBP12.96□□□□□ -0.33
HMG20B-211ENST00000486028 AGPAT1Q99943 283 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 DDX50Q9BQ39 737 aaKnown RBP12.96□□□□□ -0.33
HMG20B-211ENST00000486028 ARHGEF4Q9NR80 690 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 IFNKQ9P0W0 207 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 STOML2Q9UJZ1 356 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 FBXO4Q9UKT5 387 aa12.96□□□□□ -0.33
HMG20B-211ENST00000486028 A0A0A0MRY4 1105 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 TBC1D3BA6NDS4 549 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 CACNG3O60359 315 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 RNF40O75150 1001 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 GRAP2O75791 330 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 TRUB2O95900 331 aaKnown RBP12.95□□□□□ -0.34
HMG20B-211ENST00000486028 SLC2A3P11169 496 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 MMP8P22894 467 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 NOS2P35228 1153 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 TNFRSF4P43489 277 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 MRE11P49959 708 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 RNASE9P60153 205 aaKnown RBP12.95□□□□□ -0.34
HMG20B-211ENST00000486028 CSTF1Q05048 431 aaKnown RBP12.95□□□□□ -0.34
HMG20B-211ENST00000486028 GAS6Q14393 721 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 ASIC2Q16515 512 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 SFMBT2Q5VUG0 894 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 GRAMD4Q6IC98 578 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 IRF2BP2Q7Z5L9 587 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 C12orf40Q86WS4 652 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 XYLT1Q86Y38 959 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 MAML2Q8IZL2 1156 aaPredicted RBP12.95□□□□□ -0.34
HMG20B-211ENST00000486028 BHMTQ93088 406 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 IQCDQ96DY2 449 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 FCRL2Q96LA5 508 aaPredicted RBP12.95□□□□□ -0.34
HMG20B-211ENST00000486028 FAM204AQ9H8W3 233 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 RRAGDQ9NQL2 400 aaPredicted RBP12.95□□□□□ -0.34
HMG20B-211ENST00000486028 PRMT8Q9NR22 394 aaPredicted RBP12.95□□□□□ -0.34
HMG20B-211ENST00000486028 SEPT11Q9NVA2 429 aaKnown RBP12.95□□□□□ -0.34
HMG20B-211ENST00000486028 DNAJC17Q9NVM6 304 aaKnown RBP12.95□□□□□ -0.34
HMG20B-211ENST00000486028 TMEM51Q9NW97 253 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 RRN3Q9NYV6 651 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.95□□□□□ -0.34
HMG20B-211ENST00000486028 AIPL1Q9NZN9 384 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 SLC12A6Q9UHW9 1150 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 MYOFQ9NZM1 2061 aa12.95□□□□□ -0.34
HMG20B-211ENST00000486028 FAM170AA1A519 330 aa12.94□□□□□ -0.34
HMG20B-211ENST00000486028 LRRC53A6NM62 1247 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms