RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 FZD8Q9H461 694 aa7.17□□□□□ -1.26
SMC4-217ENST00000485867 EBF3Q9H4W6 596 aa7.17□□□□□ -1.26
SMC4-217ENST00000485867 TASP1Q9H6P5 420 aa7.17□□□□□ -1.26
SMC4-217ENST00000485867 KCNMB3Q9NPA1 279 aa7.17□□□□□ -1.26
SMC4-217ENST00000485867 VPS54Q9P1Q0 977 aa7.17□□□□□ -1.26
SMC4-217ENST00000485867 DDX25Q9UHL0 483 aaKnown RBP7.17□□□□□ -1.26
SMC4-217ENST00000485867 TBX20Q9UMR3 447 aa7.17□□□□□ -1.26
SMC4-217ENST00000485867 ANAPC1Q9H1A4 1944 aa7.17□□□□□ -1.26
SMC4-217ENST00000485867 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 SMIM28A0A1B0GU29 152 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 MYOCOSA0A1B0GUC4 107 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 NOTOA8MTQ0 251 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 ARHGAP6O43182 974 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 PRPF3O43395 683 aaKnown RBP7.16□□□□□ -1.26
SMC4-217ENST00000485867 SH3BP5O60239 455 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 UBOX5O94941 541 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 EDN1P05305 212 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 GJA4P35212 333 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 P2RY2P41231 377 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 ABCG1P45844 678 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 EPHB3P54753 998 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 CYP4F8P98187 520 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 AMPD2Q01433 879 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 EXOSC10Q01780 885 aaKnown RBP7.16□□□□□ -1.26
SMC4-217ENST00000485867 CYP4A11Q02928 519 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 CYP4F3Q08477 520 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 DUSP4Q13115 394 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 LYSMD4Q5XG99 296 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 TOGARAM2Q6ZUX3 1019 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 TTLL10Q6ZVT0 673 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 DNAJB7Q7Z6W7 309 aaPredicted RBP7.16□□□□□ -1.26
SMC4-217ENST00000485867 TMEFF1Q8IYR6 380 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 MINDY1Q8N5J2 469 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 LSM14AQ8ND56 463 aaKnown RBP7.16□□□□□ -1.26
SMC4-217ENST00000485867 ENOX1Q8TC92 643 aaKnown RBP7.16□□□□□ -1.26
SMC4-217ENST00000485867 RLN3Q8WXF3 142 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 FAM20AQ96MK3 541 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 PGLYRP2Q96PD5 576 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 C22orf23Q9BZE7 217 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 LSG1Q9H089 658 aaKnown RBP7.16□□□□□ -1.26
SMC4-217ENST00000485867 SLKQ9H2G2 1235 aaPredicted RBP7.16□□□□□ -1.26
SMC4-217ENST00000485867 ZSWIM4Q9H7M6 989 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 CAPN10Q9HC96 672 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 GPRC5CQ9NQ84 441 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 IGSF5Q9NSI5 407 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 KBTBD4Q9NVX7 518 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 PILRBQ9UKJ0 227 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 APOBEC2Q9Y235 224 aaKnown RBP7.16□□□□□ -1.26
SMC4-217ENST00000485867 ASB3Q9Y575 518 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 NUB1Q9Y5A7 615 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 NID2Q14112 1375 aa7.16□□□□□ -1.26
SMC4-217ENST00000485867 CCDC196A0A1B0GTZ2 297 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 SLC22A31A6NKX4 558 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 PSPNO60542 156 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 GJB3O75712 270 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 FGF19O95750 216 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 IGHDP01880 384 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 SERPINF2P08697 491 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 OR4Q2P0C623 313 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 HNRNPLP14866 589 aaKnown RBP eCLIP7.15□□□□□ -1.26
SMC4-217ENST00000485867 ALDH1A3P47895 512 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 GFPT1Q06210 699 aaPredicted RBP7.15□□□□□ -1.26
SMC4-217ENST00000485867 PRPF4BQ13523 1007 aaKnown RBP7.15□□□□□ -1.26
SMC4-217ENST00000485867 NECTIN1Q15223 517 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 DUOXA1Q1HG43 343 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 CLEC16AQ2KHT3 1053 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 DCAF4L1Q3SXM0 396 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 XKR4Q5GH76 650 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 NCAPH2Q6IBW4 605 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 FBXL19Q6PCT2 694 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 GLRX5Q86SX6 157 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 SLCO6A1Q86UG4 719 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 ZBTB8OSQ8IWT0 167 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 TPH2Q8IWU9 490 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 TTC9BQ8N6N2 239 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 FRMD1Q8N878 549 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 APPL2Q8NEU8 664 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 CEP76Q8TAP6 659 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 PIP4K2CQ8TBX8 421 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 USP33Q8TEY7 942 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 CD101Q93033 1021 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 PSMG2Q969U7 264 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 EXOC4Q96A65 974 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 SLC46A2Q9BY10 475 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 HDAC8Q9BY41 377 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 CCDC113Q9H0I3 377 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 RWDD1Q9H446 243 aaPredicted RBP7.15□□□□□ -1.26
SMC4-217ENST00000485867 PRORYQ9H606 182 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 ZNF552Q9H707 407 aaPredicted RBP7.15□□□□□ -1.26
SMC4-217ENST00000485867 ANKEF1Q9NU02 776 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 NAP1L2Q9ULW6 460 aaPredicted RBP7.15□□□□□ -1.26
SMC4-217ENST00000485867 MMP17Q9ULZ9 603 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 CCL26Q9Y258 94 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 PIEZO2Q9H5I5 2752 aa7.15□□□□□ -1.26
SMC4-217ENST00000485867 MTMR11A4FU01 709 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 ANTXRLA6NF34 631 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 ACKR2O00590 384 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 MARCH6O60337 910 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 USO1O60763 962 aaKnown RBP7.14□□□□□ -1.27
SMC4-217ENST00000485867 SEMA7AO75326 666 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms