RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 ASB16Q96NS5 453 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 PEBP4Q96S96 227 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 MYADMQ96S97 322 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 DDIT4Q9NX09 232 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 STOML2Q9UJZ1 356 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 CDH7Q9ULB5 785 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 ZFP37Q9Y6Q3 630 aaPredicted RBP16.48■□□□□ 0.23
APOE-205ENST00000485628 COL6A3P12111 3177 aa16.48■□□□□ 0.23
APOE-205ENST00000485628 GFRA2O00451 464 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 MSI1O43347 362 aaKnown RBP16.47■□□□□ 0.23
APOE-205ENST00000485628 PALMO75781 387 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 STC2O76061 302 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 KLKB1P03952 638 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 COMTP21964 271 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 KCNA5P22460 613 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 FCARP24071 287 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 GBP1P32455 592 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 TAS2R40P59535 323 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 DEUP1Q05D60 604 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 BRMS1LQ5PSV4 323 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 LRRC38Q5VT99 294 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 DAB2IPQ5VWQ8 1189 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 CC2D1AQ6P1N0 951 aaPredicted RBP16.47■□□□□ 0.23
APOE-205ENST00000485628 Q6ZNB5 142 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 NYAP1Q6ZVC0 841 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 ZSCAN30Q86W11 494 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 RIN3Q8TB24 985 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 FAM71BQ8TC56 605 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 ING5Q8WYH8 240 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 NTAN1Q96AB6 310 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 GOLPH3Q9H4A6 298 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 GKN1Q9NS71 199 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 EPS15L1Q9UBC2 864 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 USTQ9Y2C2 406 aa16.47■□□□□ 0.23
APOE-205ENST00000485628 FANCGO15287 622 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 RNF8O76064 485 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 PRAMEF12O95522 483 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 ADRA1BP35368 520 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 PEX5P50542 639 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 ARSEP51690 589 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 KCNQ1P51787 676 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 AIF1P55008 147 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 TBX4P57082 545 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 SMAD2Q15796 467 aaKnown RBP16.46■□□□□ 0.23
APOE-205ENST00000485628 CLUL1Q15846 466 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 ZC3H12AQ5D1E8 599 aaKnown RBP16.46■□□□□ 0.23
APOE-205ENST00000485628 FAM78AQ5JUQ0 283 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 TXNRD3NBQ6F5E7 133 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 HTR3DQ70Z44 454 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 POLNQ7Z5Q5 900 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 DAAM2Q86T65 1068 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 MIB1Q86YT6 1006 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 PSTKQ8IV42 348 aaKnown RBP16.46■□□□□ 0.23
APOE-205ENST00000485628 ARID3BQ8IVW6 561 aaPredicted RBP16.46■□□□□ 0.23
APOE-205ENST00000485628 FAM217AQ8IXS0 508 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 TRIM58Q8NG06 486 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 MAFAQ8NHW3 353 aaPredicted RBP16.46■□□□□ 0.23
APOE-205ENST00000485628 PLD4Q96BZ4 506 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 HES6Q96HZ4 224 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 LRRC3BQ96PB8 259 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 TDP1Q9NUW8 608 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.46■□□□□ 0.23
APOE-205ENST00000485628 OBP2AQ9NY56 170 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 RASAL2Q9UJF2 1139 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 USP18Q9UMW8 372 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 CCL26Q9Y258 94 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 CPQQ9Y646 472 aa16.46■□□□□ 0.23
APOE-205ENST00000485628 SLC12A8A0AV02 714 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 SLC2A3P11169 496 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 MBL2P11226 248 aaPredicted RBP16.45■□□□□ 0.22
APOE-205ENST00000485628 LAMP2P13473 410 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 CCR1P32246 355 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 NRG1Q02297 640 aaPredicted RBP16.45■□□□□ 0.22
APOE-205ENST00000485628 USP4Q13107 963 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 SEMA3BQ13214 749 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 NME3Q13232 169 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 ZNF77Q15935 545 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 CDO1Q16878 200 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 MEI1Q5TIA1 1274 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 EP400NLQ6ZTU2 488 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 FAM131BQ86XD5 332 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 SYCE1Q8N0S2 351 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 CCDC185Q8N715 623 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 ZSCAN18Q8TBC5 510 aaPredicted RBP16.45■□□□□ 0.22
APOE-205ENST00000485628 TEKT4Q8WW24 435 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 SMARCD2Q92925 531 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 RSPRY1Q96DX4 576 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 C1orf74Q96LT6 269 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 HAPLN3Q96S86 360 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 PRMT1Q99873 361 aaKnown RBP16.45■□□□□ 0.22
APOE-205ENST00000485628 WDCPQ9H6R7 721 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 FAM204AQ9H8W3 233 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 TRPC7Q9HCX4 862 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 FZD10Q9ULW2 581 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 HYOU1Q9Y4L1 999 aa16.45■□□□□ 0.22
APOE-205ENST00000485628 UNC80Q8N2C7 3258 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 E2F8A0AVK6 867 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 ANHXE9PGG2 379 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 LEFTY2O00292 366 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 DDX3YO15523 660 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms