RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SPAARA0A1B0GVQ0 90 aa20.15■□□□□ 0.82
COL27A1-205ENST00000485397 NDUFS2O75306 463 aa20.15■□□□□ 0.82
COL27A1-205ENST00000485397 ZBED1O96006 694 aa20.15■□□□□ 0.82
COL27A1-205ENST00000485397 MAOBP27338 520 aa20.15■□□□□ 0.82
COL27A1-205ENST00000485397 PDE4CQ08493 712 aa20.15■□□□□ 0.82
COL27A1-205ENST00000485397 STARD3Q14849 445 aa20.15■□□□□ 0.82
COL27A1-205ENST00000485397 GOLGA7BQ2TAP0 167 aa20.15■□□□□ 0.82
COL27A1-205ENST00000485397 DCAF17Q5H9S7 520 aaPredicted RBP20.15■□□□□ 0.82
COL27A1-205ENST00000485397 BHLHA9Q7RTU4 235 aa20.15■□□□□ 0.82
COL27A1-205ENST00000485397 MINDY1Q8N5J2 469 aa20.15■□□□□ 0.82
COL27A1-205ENST00000485397 PIWIL1Q96J94 861 aaKnown RBP20.15■□□□□ 0.82
COL27A1-205ENST00000485397 TMEM121BQ9BXQ6 578 aaPredicted RBP20.15■□□□□ 0.82
COL27A1-205ENST00000485397 TSPAN16Q9UKR8 245 aa20.15■□□□□ 0.82
COL27A1-205ENST00000485397 CACNA1EQ15878 2313 aa20.15■□□□□ 0.82
COL27A1-205ENST00000485397 PCNX2A6NKB5 2137 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 ARHGAP33O14559 1287 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 OPHN1O60890 802 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 PMS1P54277 932 aaKnown RBP20.14■□□□□ 0.81
COL27A1-205ENST00000485397 SLC8A3P57103 927 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 CUL2Q13617 745 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 PM20D1Q6GTS8 502 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 RABEPKQ7Z6M1 372 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 CPXM2Q8N436 756 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 UCMAQ8WVF2 138 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 ADAM33Q9BZ11 813 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 MKRN2Q9H000 416 aaKnown RBP20.14■□□□□ 0.81
COL27A1-205ENST00000485397 PRDM16Q9HAZ2 1276 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 ELOVL2Q9NXB9 296 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 PCDH15Q96QU1 1955 aa20.14■□□□□ 0.81
COL27A1-205ENST00000485397 UPK3BL1B0FP48 263 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 UPK3BL2E5RIL1 263 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 XPO1O14980 1071 aaKnown RBP20.13■□□□□ 0.81
COL27A1-205ENST00000485397 CYBBP04839 570 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 CD6P30203 668 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 SIM1P81133 766 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-205ENST00000485397 ENPP2Q13822 863 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 TRIP4Q15650 581 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-205ENST00000485397 ANKRD40Q6AI12 368 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 ANKS1BQ7Z6G8 1248 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 METTL3Q86U44 580 aaKnown RBP20.13■□□□□ 0.81
COL27A1-205ENST00000485397 RBBP8NLQ8NC74 664 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-205ENST00000485397 UBA3Q8TBC4 463 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 DDI1Q8WTU0 396 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 SORCS1Q8WY21 1168 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 ERCC4Q92889 916 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-205ENST00000485397 PLD4Q96BZ4 506 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 TOE1Q96GM8 510 aaKnown RBP20.13■□□□□ 0.81
COL27A1-205ENST00000485397 CCDC34Q96HJ3 373 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 FAM124BQ9H5Z6 455 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-205ENST00000485397 LRRC4Q9HBW1 653 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 ITM2CQ9NQX7 267 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 WSB2Q9NYS7 404 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-205ENST00000485397 COQ4Q9Y3A0 265 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 CEP295Q9C0D2 2601 aa20.13■□□□□ 0.81
COL27A1-205ENST00000485397 KCNJ18B7U540 433 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 NPC1O15118 1278 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 SLC16A3O15427 465 aaKnown RBP20.12■□□□□ 0.81
COL27A1-205ENST00000485397 HYAL3O43820 417 aaPredicted RBP20.12■□□□□ 0.81
COL27A1-205ENST00000485397 CD59P13987 128 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 CD19P15391 556 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 BCAT1P54687 386 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 FAM193AP78312 1265 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 ADIGQ0VDE8 80 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 LRMPQ12912 555 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 ZNF234Q14588 700 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 PLEKHG6Q3KR16 790 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 SGO2Q562F6 1265 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 SYCP2LQ5T4T6 812 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 ZNF658Q5TYW1 1059 aaPredicted RBP20.12■□□□□ 0.81
COL27A1-205ENST00000485397 TMEM215Q68D42 235 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 TMPRSS6Q8IU80 811 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 FMNL3Q8IVF7 1028 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 FAM217AQ8IXS0 508 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 ZC3H3Q8IXZ2 948 aaKnown RBP20.12■□□□□ 0.81
COL27A1-205ENST00000485397 FMR1NBQ8N0W7 255 aaPredicted RBP20.12■□□□□ 0.81
COL27A1-205ENST00000485397 EDEM1Q92611 657 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 FOXJ1Q92949 421 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 TSG101Q99816 390 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 GPR174Q9BXC1 333 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 CIPCQ9C0C6 399 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 RMND1Q9NWS8 449 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 USP36Q9P275 1121 aaKnown RBP20.12■□□□□ 0.81
COL27A1-205ENST00000485397 SFMBT1Q9UHJ3 866 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 ZMIZ1Q9ULJ6 1067 aa20.12■□□□□ 0.81
COL27A1-205ENST00000485397 TRIM49BA6NDI0 452 aa20.11■□□□□ 0.81
COL27A1-205ENST00000485397 SYNCRIPO60506 623 aaKnown RBP20.11■□□□□ 0.81
COL27A1-205ENST00000485397 TSPAN3O60637 253 aa20.11■□□□□ 0.81
COL27A1-205ENST00000485397 SYPP08247 313 aa20.11■□□□□ 0.81
COL27A1-205ENST00000485397 PRKCHP24723 683 aa20.11■□□□□ 0.81
COL27A1-205ENST00000485397 FKBP3Q00688 224 aaKnown RBP20.11■□□□□ 0.81
COL27A1-205ENST00000485397 BST2Q10589 180 aaKnown RBP20.11■□□□□ 0.81
COL27A1-205ENST00000485397 WDR45BQ5MNZ6 344 aa20.11■□□□□ 0.81
COL27A1-205ENST00000485397 GATA6Q92908 595 aa20.11■□□□□ 0.81
COL27A1-205ENST00000485397 SIPA1Q96FS4 1042 aa20.11■□□□□ 0.81
COL27A1-205ENST00000485397 DNAAF2Q9NVR5 837 aaKnown RBP20.11■□□□□ 0.81
COL27A1-205ENST00000485397 HESX1Q9UBX0 185 aa20.11■□□□□ 0.81
COL27A1-205ENST00000485397 SUSD2Q9UGT4 822 aa20.11■□□□□ 0.81
COL27A1-205ENST00000485397 YJEFN3A6XGL0 299 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 E7ENQ6 273 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 NCAM1P13591 858 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms