RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CAPN9O14815 690 aa18.53■□□□□ 0.56
SREBF1-213ENST00000485080 GSCP56915 257 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-213ENST00000485080 ARID5AQ03989 594 aa18.53■□□□□ 0.56
SREBF1-213ENST00000485080 CLEC16AQ2KHT3 1053 aa18.53■□□□□ 0.56
SREBF1-213ENST00000485080 FBXO43Q4G163 708 aa18.53■□□□□ 0.56
SREBF1-213ENST00000485080 FSTL4Q6MZW2 842 aa18.53■□□□□ 0.56
SREBF1-213ENST00000485080 PPP1R2P3Q6NXS1 205 aa18.53■□□□□ 0.56
SREBF1-213ENST00000485080 PHF13Q86YI8 300 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-213ENST00000485080 CPA5Q8WXQ8 436 aa18.53■□□□□ 0.56
SREBF1-213ENST00000485080 FBRSL1Q9HCM7 1045 aaKnown RBP18.53■□□□□ 0.56
SREBF1-213ENST00000485080 CAPN11Q9UMQ6 739 aa18.53■□□□□ 0.56
SREBF1-213ENST00000485080 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-213ENST00000485080 MSI1O43347 362 aaKnown RBP18.52■□□□□ 0.56
SREBF1-213ENST00000485080 DAB1O75553 588 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 TRUB2O95900 331 aaKnown RBP18.52■□□□□ 0.56
SREBF1-213ENST00000485080 HMBSP08397 361 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 COL9A1P20849 921 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 NOS2P35228 1153 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 MATKP42679 507 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 TBX4P57082 545 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 ZBED6P86452 979 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 CDK17Q00537 523 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 PTP4A2Q12974 167 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 PREPLQ4J6C6 727 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-213ENST00000485080 ADGRF1Q5T601 910 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 SFMBT2Q5VUG0 894 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 SARM1Q6SZW1 724 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 TAC4Q86UU9 113 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 DENND1CQ8IV53 801 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 DEFB106AQ8N104 65 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 RNF214Q8ND24 703 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 CCDC26Q8TAB7 109 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 OLIG1Q8TAK6 271 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 NT5C3BQ969T7 300 aa18.52■□□□□ 0.56
SREBF1-213ENST00000485080 FCRL2Q96LA5 508 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-213ENST00000485080 IRAK2O43187 625 aa18.51■□□□□ 0.55
SREBF1-213ENST00000485080 CACNG3O60359 315 aa18.51■□□□□ 0.55
SREBF1-213ENST00000485080 PENKP01210 267 aaPredicted RBP18.51■□□□□ 0.55
SREBF1-213ENST00000485080 MTA1Q13330 715 aa18.51■□□□□ 0.55
SREBF1-213ENST00000485080 ASIC2Q16515 512 aa18.51■□□□□ 0.55
SREBF1-213ENST00000485080 DCAF6Q58WW2 860 aa18.51■□□□□ 0.55
SREBF1-213ENST00000485080 E4F1Q66K89 784 aaPredicted RBP18.51■□□□□ 0.55
SREBF1-213ENST00000485080 C1orf210Q8IVY1 113 aa18.51■□□□□ 0.55
SREBF1-213ENST00000485080 PHTF2Q8N3S3 785 aa18.51■□□□□ 0.55
SREBF1-213ENST00000485080 PGAP3Q96FM1 320 aaPredicted RBP18.51■□□□□ 0.55
SREBF1-213ENST00000485080 IRF2BPLQ9H1B7 796 aa18.51■□□□□ 0.55
SREBF1-213ENST00000485080 TMEM59LQ9UK28 342 aa18.51■□□□□ 0.55
SREBF1-213ENST00000485080 FBXO10Q9UK96 956 aa18.51■□□□□ 0.55
SREBF1-213ENST00000485080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.51■□□□□ 0.55
SREBF1-213ENST00000485080 BZW2Q9Y6E2 419 aaKnown RBP18.51■□□□□ 0.55
SREBF1-213ENST00000485080 PIEZO1Q92508 2521 aa18.51■□□□□ 0.55
SREBF1-213ENST00000485080 SLC2A3P11169 496 aa18.5■□□□□ 0.55
SREBF1-213ENST00000485080 NSFP46459 744 aaKnown RBP18.5■□□□□ 0.55
SREBF1-213ENST00000485080 SLC11A2P49281 568 aa18.5■□□□□ 0.55
SREBF1-213ENST00000485080 C1QBPQ07021 282 aaKnown RBP18.5■□□□□ 0.55
SREBF1-213ENST00000485080 FYB2Q5VWT5 728 aa18.5■□□□□ 0.55
SREBF1-213ENST00000485080 RNF43Q68DV7 783 aa18.5■□□□□ 0.55
SREBF1-213ENST00000485080 NAIF1Q69YI7 327 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-213ENST00000485080 SPEM1Q8N4L4 309 aa18.5■□□□□ 0.55
SREBF1-213ENST00000485080 VCPIP1Q96JH7 1222 aa18.5■□□□□ 0.55
SREBF1-213ENST00000485080 PNKPQ96T60 521 aa18.5■□□□□ 0.55
SREBF1-213ENST00000485080 NPY6RQ99463 290 aa18.5■□□□□ 0.55
SREBF1-213ENST00000485080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.5■□□□□ 0.55
SREBF1-213ENST00000485080 LUC7L2Q9Y383 392 aaKnown RBP18.5■□□□□ 0.55
SREBF1-213ENST00000485080 DMDP11532 3685 aa18.5■□□□□ 0.55
SREBF1-213ENST00000485080 VPS13AQ96RL7 3174 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 KCNU1A8MYU2 1149 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 CHURC1-FNTBB4DL54 471 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 TULP3O75386 442 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 GRAP2O75791 330 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 PAPSS2O95340 614 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-213ENST00000485080 EGFP01133 1207 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 GYPCP04921 128 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 CALB1P05937 261 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 GZMAP12544 262 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 TYRP14679 529 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 HNRNPH3P31942 346 aaKnown RBP18.49■□□□□ 0.55
SREBF1-213ENST00000485080 GBP1P32455 592 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 GRIA2P42262 883 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 PTPN5P54829 565 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 TCF15Q12870 199 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 TRIM14Q14142 442 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 GAS6Q14393 721 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 PPP2R5DQ14738 602 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 ANO4Q32M45 955 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 MPP7Q5T2T1 576 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 FAM102AQ5T9C2 384 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-213ENST00000485080 SPECC1LQ69YQ0 1117 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 ACAD10Q6JQN1 1059 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 MMS22LQ6ZRQ5 1243 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 MON1BQ7L1V2 547 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 BNIPLQ7Z465 357 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 C12orf40Q86WS4 652 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 PRSS33Q8NF86 280 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 SLC30A5Q8TAD4 765 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 EZH1Q92800 747 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-213ENST00000485080 XPO6Q96QU8 1125 aaKnown RBP18.49■□□□□ 0.55
SREBF1-213ENST00000485080 DDX50Q9BQ39 737 aaKnown RBP18.49■□□□□ 0.55
SREBF1-213ENST00000485080 BBS2Q9BXC9 721 aa18.49■□□□□ 0.55
SREBF1-213ENST00000485080 HAUS4Q9H6D7 363 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms