RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 LRRC53A6NM62 1247 aa27.77■■■□□ 2.04
SMDT1-203ENST00000484235 IGLV3-27P01718 113 aa27.77■■■□□ 2.04
SMDT1-203ENST00000484235 SCNN1AP37088 669 aa27.77■■■□□ 2.04
SMDT1-203ENST00000484235 TBX4P57082 545 aa27.77■■■□□ 2.04
SMDT1-203ENST00000484235 DCAF6Q58WW2 860 aa27.77■■■□□ 2.04
SMDT1-203ENST00000484235 NAIF1Q69YI7 327 aaPredicted RBP27.77■■■□□ 2.04
SMDT1-203ENST00000484235 MAMSTRQ6ZN01 415 aa27.77■■■□□ 2.04
SMDT1-203ENST00000484235 C1orf210Q8IVY1 113 aa27.77■■■□□ 2.04
SMDT1-203ENST00000484235 IQCDQ96DY2 449 aa27.77■■■□□ 2.04
SMDT1-203ENST00000484235 PCDHB18PQ96TA0 734 aa27.77■■■□□ 2.04
SMDT1-203ENST00000484235 RBM12Q9NTZ6 932 aaKnown RBP27.77■■■□□ 2.04
SMDT1-203ENST00000484235 MARK1Q9P0L2 795 aa27.77■■■□□ 2.04
SMDT1-203ENST00000484235 TLR6Q9Y2C9 796 aa27.77■■■□□ 2.04
SMDT1-203ENST00000484235 LATS1O95835 1130 aa27.76■■■□□ 2.03
SMDT1-203ENST00000484235 UNGP13051 313 aaPredicted RBP27.76■■■□□ 2.03
SMDT1-203ENST00000484235 SFMBT2Q5VUG0 894 aa27.76■■■□□ 2.03
SMDT1-203ENST00000484235 NUGGCQ68CJ6 796 aa27.76■■■□□ 2.03
SMDT1-203ENST00000484235 TPGS1Q6ZTW0 290 aa27.76■■■□□ 2.03
SMDT1-203ENST00000484235 XYLT1Q86Y38 959 aa27.76■■■□□ 2.03
SMDT1-203ENST00000484235 DEFB106AQ8N104 65 aa27.76■■■□□ 2.03
SMDT1-203ENST00000484235 BBS2Q9BXC9 721 aa27.76■■■□□ 2.03
SMDT1-203ENST00000484235 XPO4Q9C0E2 1151 aaKnown RBP27.76■■■□□ 2.03
SMDT1-203ENST00000484235 SPATA6Q9NWH7 488 aaPredicted RBP27.76■■■□□ 2.03
SMDT1-203ENST00000484235 STOML2Q9UJZ1 356 aa27.76■■■□□ 2.03
SMDT1-203ENST00000484235 A0A1W2PQJ5 194 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.75■■■□□ 2.03
SMDT1-203ENST00000484235 CBFA2T2O43439 604 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 GRAP2O75791 330 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 TRUB2O95900 331 aaKnown RBP27.75■■■□□ 2.03
SMDT1-203ENST00000484235 MMP8P22894 467 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 SLC6A11P48066 632 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 CDK17Q00537 523 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 CLEC16AQ2KHT3 1053 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 FBXO43Q4G163 708 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 FAM217AQ8IXS0 508 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 CPXM2Q8N436 756 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 ADAM32Q8TC27 787 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 AZIN2Q96A70 460 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 PNKPQ96T60 521 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 GVINP1Q7Z2Y8 2422 aa27.75■■■□□ 2.03
SMDT1-203ENST00000484235 EGFP01133 1207 aa27.74■■■□□ 2.03
SMDT1-203ENST00000484235 IGLV3-25P01717 112 aa27.74■■■□□ 2.03
SMDT1-203ENST00000484235 TYRP14679 529 aa27.74■■■□□ 2.03
SMDT1-203ENST00000484235 MTAPQ13126 283 aa27.74■■■□□ 2.03
SMDT1-203ENST00000484235 ASIC2Q16515 512 aa27.74■■■□□ 2.03
SMDT1-203ENST00000484235 PREPLQ4J6C6 727 aaPredicted RBP27.74■■■□□ 2.03
SMDT1-203ENST00000484235 ADGRF1Q5T601 910 aa27.74■■■□□ 2.03
SMDT1-203ENST00000484235 TAC4Q86UU9 113 aa27.74■■■□□ 2.03
SMDT1-203ENST00000484235 ETFBKMTQ8IXQ9 262 aa27.74■■■□□ 2.03
SMDT1-203ENST00000484235 NAT16Q8N8M0 369 aa27.74■■■□□ 2.03
SMDT1-203ENST00000484235 SLC30A5Q8TAD4 765 aa27.74■■■□□ 2.03
SMDT1-203ENST00000484235 SLC39A13Q96H72 371 aa27.74■■■□□ 2.03
SMDT1-203ENST00000484235 NUCKS1Q9H1E3 243 aaKnown RBP27.74■■■□□ 2.03
SMDT1-203ENST00000484235 A0A0A0MRY4 1105 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 NEDD8-MDP1E9PL57 170 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 DAB1O75553 588 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 GBP1P32455 592 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 NOS2P35228 1153 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 NSFP46459 744 aaKnown RBP27.73■■■□□ 2.03
SMDT1-203ENST00000484235 SLC11A2P49281 568 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 CENPCQ03188 943 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 ANGPT1Q15389 498 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 C2CD6Q53TS8 623 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 MMS22LQ6ZRQ5 1243 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 C12orf40Q86WS4 652 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 CCDC26Q8TAB7 109 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 FCRL2Q96LA5 508 aaPredicted RBP27.73■■■□□ 2.03
SMDT1-203ENST00000484235 XPO6Q96QU8 1125 aaKnown RBP27.73■■■□□ 2.03
SMDT1-203ENST00000484235 SEPT11Q9NVA2 429 aaKnown RBP27.73■■■□□ 2.03
SMDT1-203ENST00000484235 RRN3Q9NYV6 651 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 DEC1Q9P2X7 70 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 CAPN11Q9UMQ6 739 aa27.73■■■□□ 2.03
SMDT1-203ENST00000484235 FAM170AA1A519 330 aa27.72■■■□□ 2.03
SMDT1-203ENST00000484235 CACNG3O60359 315 aa27.72■■■□□ 2.03
SMDT1-203ENST00000484235 TULP3O75386 442 aa27.72■■■□□ 2.03
SMDT1-203ENST00000484235 GRIA2P42262 883 aa27.72■■■□□ 2.03
SMDT1-203ENST00000484235 MATKP42679 507 aa27.72■■■□□ 2.03
SMDT1-203ENST00000484235 RNASE9P60153 205 aaKnown RBP27.72■■■□□ 2.03
SMDT1-203ENST00000484235 EIF4EBP2Q13542 120 aaPredicted RBP27.72■■■□□ 2.03
SMDT1-203ENST00000484235 GAS6Q14393 721 aa27.72■■■□□ 2.03
SMDT1-203ENST00000484235 FAM102AQ5T9C2 384 aaPredicted RBP27.72■■■□□ 2.03
SMDT1-203ENST00000484235 PHF13Q86YI8 300 aaPredicted RBP27.72■■■□□ 2.03
SMDT1-203ENST00000484235 SPEM1Q8N4L4 309 aa27.72■■■□□ 2.03
SMDT1-203ENST00000484235 SYN2Q92777 582 aaPredicted RBP27.72■■■□□ 2.03
SMDT1-203ENST00000484235 SYT11Q9BT88 431 aa27.72■■■□□ 2.03
SMDT1-203ENST00000484235 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.72■■■□□ 2.031e-7■■■■□ 24.3
SMDT1-203ENST00000484235 MIA3Q5JRA6 1907 aa27.72■■■□□ 2.03
SMDT1-203ENST00000484235 ITIH6Q6UXX5 1313 aa27.71■■■□□ 2.03
SMDT1-203ENST00000484235 IRAK2O43187 625 aa27.71■■■□□ 2.03
SMDT1-203ENST00000484235 LAMTOR5O43504 91 aa27.71■■■□□ 2.03
SMDT1-203ENST00000484235 PENKP01210 267 aaPredicted RBP27.71■■■□□ 2.03
SMDT1-203ENST00000484235 CYBBP04839 570 aa27.71■■■□□ 2.03
SMDT1-203ENST00000484235 TNFAIP3P21580 790 aa27.71■■■□□ 2.03
SMDT1-203ENST00000484235 PRKCIP41743 596 aa27.71■■■□□ 2.03
SMDT1-203ENST00000484235 Q6ZS52 159 aa27.71■■■□□ 2.03
SMDT1-203ENST00000484235 ARCQ7LC44 396 aa27.71■■■□□ 2.03
SMDT1-203ENST00000484235 EZH1Q92800 747 aaPredicted RBP27.71■■■□□ 2.03
SMDT1-203ENST00000484235 FAM204AQ9H8W3 233 aa27.71■■■□□ 2.03
SMDT1-203ENST00000484235 ARHGEF4Q9NR80 690 aa27.71■■■□□ 2.03
SMDT1-203ENST00000484235 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms