RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 KCNK16Q96T55 309 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 SMOQ99835 787 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 UBE2TQ9NPD8 197 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-213ENST00000484112 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.5□□□□□ -0.733e-7■■■■■ 76.5
CPSF4-213ENST00000484112 SAMSN1Q9NSI8 373 aaKnown RBP10.5□□□□□ -0.73
CPSF4-213ENST00000484112 FAM49BQ9NUQ9 324 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 TBC1D14Q9P2M4 693 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 HESX1Q9UBX0 185 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 CHORDC1Q9UHD1 332 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-213ENST00000484112 SH3BP1Q9Y3L3 701 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 PCDHB4Q9Y5E5 795 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 CFAP47Q6ZTR5 3102 aa10.5□□□□□ -0.73
CPSF4-213ENST00000484112 ANAPC1Q9H1A4 1944 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 A0A0A0MRY4 1105 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 XPO1O14980 1071 aaKnown RBP10.49□□□□□ -0.73
CPSF4-213ENST00000484112 ZBTB24O43167 697 aaPredicted RBP10.49□□□□□ -0.73
CPSF4-213ENST00000484112 MED7O43513 233 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 OLFM2O95897 454 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 GABRG2P18507 467 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 ADORA2BP29275 332 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 CACNA2D1P54289 1103 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 MAP3K7CLP57077 242 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 ZNF33AQ06730 810 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 BST2Q10589 180 aaKnown RBP10.49□□□□□ -0.73
CPSF4-213ENST00000484112 CNGA2Q16280 664 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 SPDYCQ5MJ68 293 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 FKBP15Q5T1M5 1219 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 C10orf76Q5T2E6 689 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 KLHDC10Q6PID8 442 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 LCLAT1Q6UWP7 414 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 SLC36A4Q6YBV0 504 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 C11orf57Q6ZUT1 292 aaPredicted RBP10.49□□□□□ -0.73
CPSF4-213ENST00000484112 RRAGAQ7L523 313 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 PIP4P1Q86T03 277 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 DDX42Q86XP3 938 aaKnown RBP eCLIP10.49□□□□□ -0.73
CPSF4-213ENST00000484112 RGL4Q8IZJ4 473 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 SCML4Q8N228 414 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 ARHGAP18Q8N392 663 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 MINDY1Q8N5J2 469 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 ZMIZ2Q8NF64 920 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 CEP76Q8TAP6 659 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 KCTD13Q8WZ19 329 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 CDK5RAP1Q96SZ6 601 aaKnown RBP10.49□□□□□ -0.73
CPSF4-213ENST00000484112 PLCB1Q9NQ66 1216 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 TLR8Q9NR97 1041 aaKnown RBP10.49□□□□□ -0.73
CPSF4-213ENST00000484112 TMEM30AQ9NV96 361 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 FANCLQ9NW38 375 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 CALCOCO1Q9P1Z2 691 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 DEC1Q9P2X7 70 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 LIMA1Q9UHB6 759 aaKnown RBP10.49□□□□□ -0.73
CPSF4-213ENST00000484112 TSPAN16Q9UKR8 245 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 SCML2Q9UQR0 700 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 USP3Q9Y6I4 520 aa10.49□□□□□ -0.73
CPSF4-213ENST00000484112 E2F8A0AVK6 867 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 HHLA1C9JL84 531 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 H0Y626 953 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 O00370 1275 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 ARHGAP33O14559 1287 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 TRIM24O15164 1050 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 COCHO43405 550 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 TULP3O75386 442 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 BEST1O76090 585 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 TRIM16O95361 564 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 SERPINF2P08697 491 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 IRF1P10914 325 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 CHRM1P11229 460 aaPredicted RBP10.48□□□□□ -0.73
CPSF4-213ENST00000484112 HOXB2P14652 356 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 CD19P15391 556 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 ZNF18P17022 549 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 SLC9A1P19634 815 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 CDK11BP21127 795 aaKnown RBP10.48□□□□□ -0.73
CPSF4-213ENST00000484112 PLA2G4AP47712 749 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 KIF11P52732 1056 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 BPIFB4P59827 614 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 ORC1Q13415 861 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 NCAPHQ15003 741 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 KRT31Q15323 416 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 ANO6Q4KMQ2 910 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 RAB41Q5JT25 222 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 HECTD3Q5T447 861 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 SDE2Q6IQ49 451 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 C19orf48Q6RUI8 117 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 NUDT18Q6ZVK8 323 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 CCDC186Q7Z3E2 898 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 TRMT11Q7Z4G4 463 aaKnown RBP10.48□□□□□ -0.73
CPSF4-213ENST00000484112 ARHGEF19Q8IW93 802 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 BBS7Q8IWZ6 715 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 RBBP8NLQ8NC74 664 aaPredicted RBP10.48□□□□□ -0.73
CPSF4-213ENST00000484112 SHC3Q92529 594 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 FBXO32Q969P5 355 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 KREMEN1Q96MU8 473 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 CAMK1GQ96NX5 476 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 CRACR2AQ9BSW2 395 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 FUCA2Q9BTY2 467 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 NACA2Q9H009 215 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 CLIC5Q9NZA1 410 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 CYP8B1Q9UNU6 501 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.48□□□□□ -0.73
CPSF4-213ENST00000484112 PCDHB9Q9Y5E1 797 aa10.48□□□□□ -0.73
CPSF4-213ENST00000484112 ASCC3Q8N3C0 2202 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms