RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 MATKP42679 507 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 VCPP55072 806 aaKnown RBP16.26■□□□□ 0.19
RPP40-206ENST00000483546 KLHL30Q0D2K2 578 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 FBXO43Q4G163 708 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 DCAF6Q58WW2 860 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 LY6G5CQ5SRR4 150 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 FAM102AQ5T9C2 384 aaPredicted RBP16.26■□□□□ 0.19
RPP40-206ENST00000483546 SYPL2Q5VXT5 272 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 TXNDC11Q6PKC3 985 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 DENND1CQ8IV53 801 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 DEFB106AQ8N104 65 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 PIWIL1Q96J94 861 aaKnown RBP16.26■□□□□ 0.19
RPP40-206ENST00000483546 VCPIP1Q96JH7 1222 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 PCDHB18PQ96TA0 734 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 DDX50Q9BQ39 737 aaKnown RBP16.26■□□□□ 0.19
RPP40-206ENST00000483546 SEPT11Q9NVA2 429 aaKnown RBP16.26■□□□□ 0.19
RPP40-206ENST00000483546 DLGAP2Q9P1A6 1054 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 AGO1Q9UL18 857 aaKnown RBP16.26■□□□□ 0.19
RPP40-206ENST00000483546 NDRG2Q9UN36 371 aaKnown RBP16.26■□□□□ 0.19
RPP40-206ENST00000483546 HCN4Q9Y3Q4 1203 aa16.26■□□□□ 0.19
RPP40-206ENST00000483546 SCAMP3O14828 347 aaKnown RBP16.25■□□□□ 0.19
RPP40-206ENST00000483546 MSI1O43347 362 aaKnown RBP16.25■□□□□ 0.19
RPP40-206ENST00000483546 CYBBP04839 570 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 GYPCP04921 128 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 CHRNB1P11230 501 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 GZMAP12544 262 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 SLC11A2P49281 568 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 EIF4EBP2Q13542 120 aaPredicted RBP16.25■□□□□ 0.19
RPP40-206ENST00000483546 CCINQ13939 588 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 PON2Q15165 354 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 ADGRF1Q5T601 910 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 MAMSTRQ6ZN01 415 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 MMS22LQ6ZRQ5 1243 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 TAC4Q86UU9 113 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 VPS36Q86VN1 386 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 VSTM4Q8IW00 320 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 CHFRQ96EP1 664 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 SLC39A13Q96H72 371 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 XPO6Q96QU8 1125 aaKnown RBP16.25■□□□□ 0.19
RPP40-206ENST00000483546 CHRDQ9H2X0 955 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 HAUS4Q9H6D7 363 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.25■□□□□ 0.19
RPP40-206ENST00000483546 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.25■□□□□ 0.19
RPP40-206ENST00000483546 ADAM22Q9P0K1 906 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 ARIH1Q9Y4X5 557 aaPredicted RBP16.25■□□□□ 0.19
RPP40-206ENST00000483546 PAXBP1Q9Y5B6 917 aa16.25■□□□□ 0.19
RPP40-206ENST00000483546 PI15O43692 258 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 CACNG3O60359 315 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 F9P00740 461 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 APOEP02649 317 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 SERPING1P05155 500 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 OPRD1P41143 372 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 FZD5Q13467 585 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 TAF5Q15542 800 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 GAB4Q2WGN9 574 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 ANO4Q32M45 955 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 ACAD10Q6JQN1 1059 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 NUDT18Q6ZVK8 323 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 ETFBKMTQ8IXQ9 262 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 DRC7Q8IY82 874 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 DTWD2Q8NBA8 298 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 PGAP3Q96FM1 320 aaPredicted RBP16.24■□□□□ 0.19
RPP40-206ENST00000483546 FCRL2Q96LA5 508 aaPredicted RBP16.24■□□□□ 0.19
RPP40-206ENST00000483546 PNKPQ96T60 521 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 C11orf70Q9BRQ4 267 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 BBS2Q9BXC9 721 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 TRIM5Q9C035 493 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 FAM204AQ9H8W3 233 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 LMAN1LQ9HAT1 526 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 SLC12A6Q9UHW9 1150 aa16.24■□□□□ 0.19
RPP40-206ENST00000483546 MTF2Q9Y483 593 aaPredicted RBP16.24■□□□□ 0.19
RPP40-206ENST00000483546 GALR2O43603 387 aaPredicted RBP16.23■□□□□ 0.19
RPP40-206ENST00000483546 GRAP2O75791 330 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 DCNP07585 359 aaKnown RBP16.23■□□□□ 0.19
RPP40-206ENST00000483546 HNRNPH3P31942 346 aaKnown RBP16.23■□□□□ 0.19
RPP40-206ENST00000483546 CASP14P31944 242 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 CCR1P32246 355 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 GALK1P51570 392 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 PTP4A2Q12974 167 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 PPP2R5DQ14738 602 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 MPPE1Q53F39 396 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 E4F1Q66K89 784 aaPredicted RBP16.23■□□□□ 0.19
RPP40-206ENST00000483546 MON1BQ7L1V2 547 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 ZNF571Q7Z3V5 609 aaPredicted RBP16.23■□□□□ 0.19
RPP40-206ENST00000483546 TMEM25Q86YD3 366 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 C3orf20Q8ND61 904 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 SLC30A5Q8TAD4 765 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 CPLX3Q8WVH0 158 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 NT5C3BQ969T7 300 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 NPY6RQ99463 290 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 IRF2BPLQ9H1B7 796 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 DDIT4Q9NX09 232 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 DEC1Q9P2X7 70 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 TMEM59LQ9UK28 342 aa16.23■□□□□ 0.19
RPP40-206ENST00000483546 A0A0A0MRY4 1105 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 GOLGA8SH3BPF8 625 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 ACSL4O60488 711 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 PENKP01210 267 aaPredicted RBP16.22■□□□□ 0.19
RPP40-206ENST00000483546 APODP05090 189 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 TYRP14679 529 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms