RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 SERPINB11Q96P15 392 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 FAM126AQ9BYI3 521 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-225ENST00000483506 FBXO10Q9UK96 956 aa18.77■□□□□ 0.6
HDAC6-225ENST00000483506 ATG13O75143 517 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 KAT7O95251 611 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 CYP1A1P04798 512 aaPredicted RBP18.76■□□□□ 0.59
HDAC6-225ENST00000483506 APODP05090 189 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 TYRP14679 529 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 CHRNB2P17787 502 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 HOXA6P31267 233 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 GRIA2P42262 883 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 CXCL12P48061 93 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 ZNF445P59923 1031 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 FMO1Q01740 532 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 SATB1Q01826 763 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 SLC6A3Q01959 620 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 PPP2R5DQ14738 602 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 TAF5Q15542 800 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 NFKBIBQ15653 356 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 FYB2Q5VWT5 728 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 SYPL2Q5VXT5 272 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 PKN3Q6P5Z2 889 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 TPGS1Q6ZTW0 290 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 TOGARAM2Q6ZUX3 1019 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 TAC4Q86UU9 113 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 UNC45BQ8IWX7 931 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 SLC20A1Q8WUM9 679 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 XPO6Q96QU8 1125 aaKnown RBP18.76■□□□□ 0.59
HDAC6-225ENST00000483506 BBS2Q9BXC9 721 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 IRX2Q9BZI1 471 aaPredicted RBP18.76■□□□□ 0.59
HDAC6-225ENST00000483506 PDCL3Q9H2J4 239 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 ARHGEF4Q9NR80 690 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 DEC1Q9P2X7 70 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 TLR6Q9Y2C9 796 aa18.76■□□□□ 0.59
HDAC6-225ENST00000483506 NEDD8-MDP1E9PL57 170 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 K7ESF4 209 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 CAPN9O14815 690 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 TNFRSF4P43489 277 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 TBX4P57082 545 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 CSTF1Q05048 431 aaKnown RBP18.75■□□□□ 0.59
HDAC6-225ENST00000483506 TRIM72Q6ZMU5 477 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 TERB1Q8NA31 727 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 ZBTB44Q8NCP5 570 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 USP33Q8TEY7 942 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 BAP1Q92560 729 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 FCRL2Q96LA5 508 aaPredicted RBP18.75■□□□□ 0.59
HDAC6-225ENST00000483506 SYNCQ9H7C4 482 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 FAM86C1Q9NVL1 165 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 C2orf42Q9NWW7 574 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 ATG2BQ96BY7 2078 aa18.75■□□□□ 0.59
HDAC6-225ENST00000483506 IRAK2O43187 625 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 DAB1O75553 588 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 TRUB2O95900 331 aaKnown RBP18.74■□□□□ 0.59
HDAC6-225ENST00000483506 SERPINC1P01008 464 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 FANCCQ00597 558 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 HSF5Q4G112 596 aaPredicted RBP18.74■□□□□ 0.59
HDAC6-225ENST00000483506 ADGRF1Q5T601 910 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 RNF43Q68DV7 783 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 OR6B2Q6IFH4 312 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 ZC3H14Q6PJT7 736 aaKnown RBP18.74■□□□□ 0.59
HDAC6-225ENST00000483506 CACNA2D4Q7Z3S7 1137 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 ERICH1Q86X53 443 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 XYLT1Q86Y38 959 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 NAT16Q8N8M0 369 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 MSANTD4Q8NCY6 345 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 RPLP0P6Q8NHW5 317 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 KCNV2Q8TDN2 545 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 ACDQ96AP0 544 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 C18orf8Q96DM3 657 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 TTYH3Q9C0H2 523 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 DNAJC17Q9NVM6 304 aaKnown RBP18.74■□□□□ 0.59
HDAC6-225ENST00000483506 ZSCAN32Q9NX65 697 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 PCDHGA2Q9Y5H1 932 aa18.74■□□□□ 0.59
HDAC6-225ENST00000483506 GOLGA6L19H0YKK7 550 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 LILRB5O75023 590 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 CISD3P0C7P0 127 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 UNGP13051 313 aaPredicted RBP18.73■□□□□ 0.59
HDAC6-225ENST00000483506 PBX1P40424 430 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 KIR2DL1P43626 348 aaPredicted RBP18.73■□□□□ 0.59
HDAC6-225ENST00000483506 MRPS21P82921 87 aaKnown RBP18.73■□□□□ 0.59
HDAC6-225ENST00000483506 KDSRQ06136 332 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 DCAF6Q58WW2 860 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 FIGNQ5HY92 759 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 NAA35Q5VZE5 725 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 GRAMD4Q6IC98 578 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 SYT13Q7L8C5 426 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 ARCQ7LC44 396 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 SFTPA1Q8IWL2 248 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 DEFB106AQ8N104 65 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 PHOX2BQ99453 314 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 EDEM3Q9BZQ6 932 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 SEMA4AQ9H3S1 761 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 SLC27A6Q9Y2P4 619 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 STARD13Q9Y3M8 1113 aa18.73■□□□□ 0.59
HDAC6-225ENST00000483506 ACSL4O60488 711 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 CYBBP04839 570 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 CCDC172P0C7W6 258 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 FERP16591 822 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 MMP8P22894 467 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 SLC11A2P49281 568 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms