RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 PDE6CP51160 858 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 GALK1P51570 392 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 SHC2P98077 582 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 ID3Q02535 119 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 CREB5Q02930 508 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 DMC1Q14565 340 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 KCNB1Q14721 858 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 PPP2R5EQ16537 467 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 PLK5Q496M5 336 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 N4BP2L1Q5TBK1 243 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-207ENST00000483407 DAB2IPQ5VWQ8 1189 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 CDCP2Q5VXM1 449 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 LARP1BQ659C4 914 aaKnown RBP6.28□□□□□ -1.4
CSDE1-207ENST00000483407 LINC00114Q6XXX2 140 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 SYT13Q7L8C5 426 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 ZNF720Q7Z2F6 126 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 BRAPQ7Z569 592 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 TMEM150AQ86TG1 271 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 SFR1Q86XK3 245 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 SPATA2LQ8IUW3 424 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-207ENST00000483407 EFCAB13Q8IY85 973 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 SYCP3Q8IZU3 236 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 TMEM86AQ8N2M4 240 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 PDCL2Q8N4E4 241 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 LRRC52Q8N7C0 313 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 RPLP0P6Q8NHW5 317 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 SPATA18Q8TC71 538 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 UBASH3BQ8TF42 649 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 OSCP1Q8WVF1 389 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 CD101Q93033 1021 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 ATP2A3Q93084 1043 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 CHFRQ96EP1 664 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 TRMT2BQ96GJ1 504 aaKnown RBP6.28□□□□□ -1.4
CSDE1-207ENST00000483407 FUBP3Q96I24 572 aaKnown RBP eCLIP6.28□□□□□ -1.4
CSDE1-207ENST00000483407 TMX3Q96JJ7 454 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 MYRFLQ96LU7 910 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 ACCSQ96QU6 501 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 FAM213AQ9BRX8 229 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 EDEM2Q9BV94 578 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 LSM14BQ9BX40 385 aaKnown RBP6.28□□□□□ -1.4
CSDE1-207ENST00000483407 ECT2Q9H8V3 914 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 MRPL44Q9H9J2 332 aaKnown RBP6.28□□□□□ -1.4
CSDE1-207ENST00000483407 TRPC7Q9HCX4 862 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 RAD18Q9NS91 495 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 SEL1LQ9UBV2 794 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 CCDC39Q9UFE4 941 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 AGAP1Q9UPQ3 857 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 SMC3Q9UQE7 1217 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 MAPK8IP1Q9UQF2 711 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-207ENST00000483407 SPTBN2O15020 2390 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 COL4A2P08572 1712 aa6.28□□□□□ -1.4
CSDE1-207ENST00000483407 TICRRQ7Z2Z1 1910 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 CITO14578 2027 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 PRAMEF27A3QJZ7 478 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 TNFRSF10CO14798 259 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 FANCGO15287 622 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 TMPRSS2O15393 492 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 PDPK1O15530 556 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 KCNK5O95279 499 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 GCNT3O95395 438 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 NFATC1O95644 943 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 CAVIN2O95810 425 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 ITGB3P05106 788 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 PGRP06401 933 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 KRT19P08727 400 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 TMEM191BP0C7N4 346 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 PFKLP17858 780 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 HDCP19113 662 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 CYP2F1P24903 491 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 ADSSP30520 456 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 DGKEP52429 567 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 RBP5P82980 135 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 MYO1EQ12965 1108 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 ALCAMQ13740 583 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 ZNF77Q15935 545 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 DUOXA2Q1HG44 320 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 CFAP221Q4G0U5 840 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 USP39Q53GS9 565 aaKnown RBP6.27□□□□□ -1.41
CSDE1-207ENST00000483407 L1TD1Q5T7N2 865 aaKnown RBP6.27□□□□□ -1.41
CSDE1-207ENST00000483407 SDHAF4Q5VUM1 108 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 CRELD2Q6UXH1 353 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-207ENST00000483407 C4orf50Q6ZRC1 276 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 NLRC3Q7RTR2 1065 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 DYMQ7RTS9 669 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 BRSK2Q8IWQ3 736 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 SCN4BQ8IWT1 228 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 ADGRF2Q8IZF7 708 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 CSGALNACT2Q8N6G5 542 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 TOP6BLQ8N6T0 577 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 STKLD1Q8NE28 680 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 TSTD1Q8NFU3 115 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 SH3RF2Q8TEC5 729 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 LRRC15Q8TF66 581 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 NOC3LQ8WTT2 800 aaKnown RBP6.27□□□□□ -1.41
CSDE1-207ENST00000483407 TRIM11Q96F44 468 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 SMOC1Q9H4F8 434 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 UPF2Q9HAU5 1272 aaKnown RBP6.27□□□□□ -1.41
CSDE1-207ENST00000483407 FBRSL1Q9HCM7 1045 aaKnown RBP6.27□□□□□ -1.41
CSDE1-207ENST00000483407 ST7Q9NRC1 585 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms