RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 COG7P83436 770 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 ENPP2Q13822 863 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 ZNF234Q14588 700 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 FYB2Q5VWT5 728 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 SV2AQ7L0J3 742 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 TADA2BQ86TJ2 420 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 CACUL1Q86Y37 369 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 C1orf216Q8TAB5 229 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 SORCS1Q8WY21 1168 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 TAF4BQ92750 862 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 PIWIL1Q96J94 861 aaKnown RBP13.47□□□□□ -0.25
TMEM54-206ENST00000482771 ZSCAN16Q9H4T2 348 aaPredicted RBP13.47□□□□□ -0.25
TMEM54-206ENST00000482771 CLEC4EQ9ULY5 219 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 PCDHGB2Q9Y5G2 931 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 PCDHA5Q9Y5H7 936 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 SETXQ7Z333 2677 aaKnown RBP13.47□□□□□ -0.25
TMEM54-206ENST00000482771 MYH10P35580 1976 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 PVALEFA0A1B0GWK0 134 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 KCNK3O14649 394 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 POLR2DO15514 142 aaKnown RBP13.46□□□□□ -0.25
TMEM54-206ENST00000482771 TIMM44O43615 452 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 STX6O43752 255 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 PPP6R2O75170 966 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 EPHX1P07099 455 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 TRIM21P19474 475 aaKnown RBP13.46□□□□□ -0.25
TMEM54-206ENST00000482771 COPAP53621 1224 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 EFEMP1Q12805 493 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 KIF19Q2TAC6 998 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 ZACNQ401N2 412 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 CCDC157Q569K6 752 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 SHC4Q6S5L8 630 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 ZNF276Q8N554 614 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 GOLGA5Q8TBA6 731 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 BAHD1Q8TBE0 780 aaPredicted RBP13.46□□□□□ -0.25
TMEM54-206ENST00000482771 SNX19Q92543 992 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 TWNKQ96RR1 684 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 DCLK3Q9C098 648 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 CIPCQ9C0C6 399 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 SCUBE2Q9NQ36 999 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 FOXD4L1Q9NU39 408 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 DMAC2Q9NW81 257 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 AGO1Q9UL18 857 aaKnown RBP13.46□□□□□ -0.25
TMEM54-206ENST00000482771 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
TMEM54-206ENST00000482771 BTBD3Q9Y2F9 522 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 SNX11Q9Y5W9 270 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 SLCO1B1Q9Y6L6 691 aa13.46□□□□□ -0.25
TMEM54-206ENST00000482771 NUMA1Q14980 2115 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 FAM149AA5PLN7 773 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 FLRT2O43155 660 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 DKK1O94907 266 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 ASS1P00966 412 aaKnown RBP13.45□□□□□ -0.26
TMEM54-206ENST00000482771 IGLV3-19P01714 112 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 CYBBP04839 570 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 PRKCHP24723 683 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 CORO1AP31146 461 aaKnown RBP13.45□□□□□ -0.26
TMEM54-206ENST00000482771 AFMP43652 599 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 ASPAP45381 313 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 PSEN1P49768 467 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 CUL4BQ13620 913 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 E2F5Q15329 346 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 TMEM215Q68D42 235 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 ANKS1BQ7Z6G8 1248 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 DENND1CQ8IV53 801 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 GALNT15Q8N3T1 639 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 DDI1Q8WTU0 396 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 NT5C1AQ9BXI3 368 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 DUSP16Q9BY84 665 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 C6orf106Q9H6K1 298 aaPredicted RBP13.45□□□□□ -0.26
TMEM54-206ENST00000482771 CLIC5Q9NZA1 410 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 DKK4Q9UBT3 224 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 RASAL2Q9UJF2 1139 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 ANKRD6Q9Y2G4 727 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 LOC400499M0QZD8 3231 aa13.45□□□□□ -0.26
TMEM54-206ENST00000482771 TNFSF14O43557 240 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 CUTAO60888 179 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 ZIC2O95409 532 aaPredicted RBP13.44□□□□□ -0.26
TMEM54-206ENST00000482771 HLA-DRAP01903 254 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 HLA-EP13747 358 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 ACSL1P33121 698 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 AFF3P51826 1226 aaKnown RBP13.44□□□□□ -0.26
TMEM54-206ENST00000482771 ARID5AQ03989 594 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 STK4Q13043 487 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 CAMK2BQ13554 666 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 SERPINA13PQ6UXR4 307 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 CCDC186Q7Z3E2 898 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 SLC9A9Q8IVB4 645 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 RBBP8NLQ8NC74 664 aaPredicted RBP13.44□□□□□ -0.26
TMEM54-206ENST00000482771 TMC2Q8TDI7 906 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 ZNF396Q96N95 335 aaPredicted RBP13.44□□□□□ -0.26
TMEM54-206ENST00000482771 CDK5RAP1Q96SZ6 601 aaKnown RBP13.44□□□□□ -0.26
TMEM54-206ENST00000482771 PNPLA8Q9NP80 782 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 USP3Q9Y6I4 520 aa13.44□□□□□ -0.26
TMEM54-206ENST00000482771 PTPRBP23467 1997 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 SLC12A8A0AV02 714 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 IKBKBO14920 756 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 CD58P19256 250 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 PIK3CAP42336 1068 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 EIF4HQ15056 248 aaKnown RBP13.43□□□□□ -0.26
TMEM54-206ENST00000482771 TEAD4Q15561 434 aa13.43□□□□□ -0.26
TMEM54-206ENST00000482771 C1orf220Q5T0J3 134 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms