RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 NDUFV2P19404 249 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 CHKAP35790 457 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 USP8P40818 1118 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 P2RY2P41231 377 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 SGSHP51688 502 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 ZNF132P52740 706 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 MFAP3P55082 362 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 GCNT1Q02742 428 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 ARHGAP44Q17R89 818 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 PLA2G2CQ5R387 149 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 DENND1BQ6P3S1 775 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 TRIM65Q6PJ69 517 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 FOXR2Q6PJQ5 311 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 TMEFF1Q8IYR6 380 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 ZNF276Q8N554 614 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 OLIG1Q8TAK6 271 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 DDI1Q8WTU0 396 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 SLC35F5Q8WV83 523 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 SORCS1Q8WY21 1168 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 KCTD13Q8WZ19 329 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 EDEM2Q9BV94 578 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 DCLK3Q9C098 648 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 UBE2TQ9NPD8 197 aaPredicted RBP10.94□□□□□ -0.66
CPSF4-212ENST00000482251 CNGB3Q9NQW8 809 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 OLA1Q9NTK5 396 aaKnown RBP10.94□□□□□ -0.66
CPSF4-212ENST00000482251 MBD1Q9UIS9 605 aaPredicted RBP10.94□□□□□ -0.66
CPSF4-212ENST00000482251 KIAA1257Q9ULG3 409 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 ZNF510Q9Y2H8 683 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 PCDHGA5Q9Y5G8 931 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 NUP205Q92621 2012 aa10.94□□□□□ -0.66
CPSF4-212ENST00000482251 FAM170AA1A519 330 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 BCLAF3A2AJT9 711 aaKnown RBP10.93□□□□□ -0.66
CPSF4-212ENST00000482251 MAP3K13O43283 966 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 THAP12O43422 761 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 LETM1O95202 739 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-212ENST00000482251 FGFR1OPO95684 399 aaKnown RBP10.93□□□□□ -0.66
CPSF4-212ENST00000482251 LTFP02788 710 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 CYBBP04839 570 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 CISD3P0C7P0 127 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 SLC9A1P19634 815 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 SDHBP21912 280 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 PTGER3P43115 390 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 MTIF2P46199 727 aaKnown RBP10.93□□□□□ -0.66
CPSF4-212ENST00000482251 HARS2P49590 506 aaKnown RBP10.93□□□□□ -0.66
CPSF4-212ENST00000482251 TRIP4Q15650 581 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-212ENST00000482251 CNGA2Q16280 664 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 TPD52L1Q16890 204 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-212ENST00000482251 MAP7D1Q3KQU3 841 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 DPCR1Q3MIW9 517 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 IL31Q6EBC2 164 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 SDE2Q6IQ49 451 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 KIAA1324Q6UXG2 1013 aaKnown RBP10.93□□□□□ -0.66
CPSF4-212ENST00000482251 LPCAT2Q7L5N7 544 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 ANKS1BQ7Z6G8 1248 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 ADAM32Q8TC27 787 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 IPO4Q8TEX9 1081 aaKnown RBP10.93□□□□□ -0.66
CPSF4-212ENST00000482251 PIGKQ92643 395 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 GOLGA1Q92805 767 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 FAM149B1Q96BN6 582 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 CIPCQ9C0C6 399 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 CLSTN2Q9H4D0 955 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 VPS45Q9NRW7 570 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 ABCC13Q9NSE7 274 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 AJAP1Q9UKB5 411 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-212ENST00000482251 CYP8B1Q9UNU6 501 aa10.93□□□□□ -0.66
CPSF4-212ENST00000482251 TNRC6BQ9UPQ9 1833 aaKnown RBP10.93□□□□□ -0.66
CPSF4-212ENST00000482251 PLXND1Q9Y4D7 1925 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 LAMA1P25391 3075 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 GOLGA6L7A0A1B0GV03 622 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 LNP1A1A4G5 178 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 PNMA6AP0CW24 399 aaPredicted RBP10.92□□□□□ -0.66
CPSF4-212ENST00000482251 NCAM1P13591 858 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 HOXD9P28356 352 aaPredicted RBP10.92□□□□□ -0.66
CPSF4-212ENST00000482251 GNA15P30679 374 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 ANP32AP39687 249 aaKnown RBP10.92□□□□□ -0.66
CPSF4-212ENST00000482251 IL12RB1P42701 662 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 RPL6Q02878 288 aaKnown RBP10.92□□□□□ -0.66
CPSF4-212ENST00000482251 STILQ15468 1287 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 PPM1JQ5JR12 505 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 STPG1Q5TH74 334 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 RNF43Q68DV7 783 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 MSANTD2Q6P1R3 559 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 RFWD3Q6PCD5 774 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 C11orf74Q86VG3 221 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 PASD1Q8IV76 773 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 SCUBE3Q8IX30 993 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 CPXM2Q8N436 756 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 KCNV2Q8TDN2 545 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 GABRG3Q99928 467 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 FSCN3Q9NQT6 498 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 TJP2Q9UDY2 1190 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 CYTH4Q9UIA0 394 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 STARD13Q9Y3M8 1113 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 HBS1LQ9Y450 684 aaKnown RBP10.92□□□□□ -0.66
CPSF4-212ENST00000482251 STON1Q9Y6Q2 735 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 SPTBN2O15020 2390 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 NCOR2Q9Y618 2525 aa10.92□□□□□ -0.66
CPSF4-212ENST00000482251 MUC22E2RYF6 1773 aaPredicted RBP10.91□□□□□ -0.66
CPSF4-212ENST00000482251 BECN2A8MW95 431 aa10.91□□□□□ -0.66
CPSF4-212ENST00000482251 E5RJQ4 531 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms