RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SPECC1L-ADORA2AF8WAN1 911 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 GJB6O95452 261 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 IGF2RP11717 2491 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 SKILP12757 684 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 UNGP13051 313 aaPredicted RBP11.05□□□□□ -0.64
SSBP1-210ENST00000481508 TFE3P19532 575 aaPredicted RBP11.05□□□□□ -0.64
SSBP1-210ENST00000481508 KPNA1P52294 538 aaPredicted RBP11.05□□□□□ -0.64
SSBP1-210ENST00000481508 PLCB2Q00722 1185 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 PRKCQQ04759 706 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 MESP2Q0VG99 397 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 DSG2Q14126 1118 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 PDGFRLQ15198 375 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 ITPRIPL2Q3MIP1 535 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 FIGNQ5HY92 759 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 OTUD1Q5VV17 481 aaPredicted RBP11.05□□□□□ -0.64
SSBP1-210ENST00000481508 RALGAPA1Q6GYQ0 2036 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 OR6B2Q6IFH4 312 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 CC2D1AQ6P1N0 951 aaPredicted RBP11.05□□□□□ -0.64
SSBP1-210ENST00000481508 MMS22LQ6ZRQ5 1243 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 ZNF571Q7Z3V5 609 aaPredicted RBP11.05□□□□□ -0.64
SSBP1-210ENST00000481508 TAC4Q86UU9 113 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 C12orf40Q86WS4 652 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 DDX42Q86XP3 938 aaKnown RBP eCLIP11.05□□□□□ -0.64
SSBP1-210ENST00000481508 XYLT1Q86Y38 959 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 CCDC105Q8IYK2 499 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 TMEM35BQ8NCS4 154 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 CSGALNACT1Q8TDX6 532 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 DQX1Q8TE96 717 aaKnown RBP11.05□□□□□ -0.64
SSBP1-210ENST00000481508 CPLX3Q8WVH0 158 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 FAM149B1Q96BN6 582 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 HINFPQ9BQA5 517 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 C11orf70Q9BRQ4 267 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 PDCL3Q9H2J4 239 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 FBRSL1Q9HCM7 1045 aaKnown RBP11.05□□□□□ -0.64
SSBP1-210ENST00000481508 LTB4R2Q9NPC1 389 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 DLL3Q9NYJ7 618 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 TAS2R14Q9NYV8 317 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 CALCOCO1Q9P1Z2 691 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 SH3BP1Q9Y3L3 701 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 R4GN57 208 aa11.05□□□□□ -0.64
SSBP1-210ENST00000481508 KANSL1LA0AUZ9 987 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 LSM8O95777 96 aaKnown RBP11.04□□□□□ -0.64
SSBP1-210ENST00000481508 IGLV3-25P01717 112 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 IGLV3-27P01718 113 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 DCNP07585 359 aaKnown RBP11.04□□□□□ -0.64
SSBP1-210ENST00000481508 NCAM1P13591 858 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 FERP16591 822 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 CORO1AP31146 461 aaKnown RBP11.04□□□□□ -0.64
SSBP1-210ENST00000481508 GJA4P35212 333 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 GABRB2P47870 512 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 UBXN2BQ14CS0 331 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 PON2Q15165 354 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 ANGPT1Q15389 498 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 DHCR24Q15392 516 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 TRIP4Q15650 581 aaPredicted RBP11.04□□□□□ -0.64
SSBP1-210ENST00000481508 ASIC2Q16515 512 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 RSPO4Q2I0M5 234 aaPredicted RBP11.04□□□□□ -0.64
SSBP1-210ENST00000481508 CLEC16AQ2KHT3 1053 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 SFMBT2Q5VUG0 894 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 HGSNATQ68CP4 663 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 RHBDF2Q6PJF5 856 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 HTR3DQ70Z44 454 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 ZNF677Q86XU0 584 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 SFTPA1Q8IWL2 248 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 ADGRG2Q8IZP9 1017 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 DEFB106AQ8N104 65 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 PJA1Q8NG27 643 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 RNF139Q8WU17 664 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 FAM3CQ92520 227 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 EZH1Q92800 747 aaPredicted RBP11.04□□□□□ -0.64
SSBP1-210ENST00000481508 ATP2A3Q93084 1043 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 MYEOVQ96EZ4 313 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 FCRL2Q96LA5 508 aaPredicted RBP11.04□□□□□ -0.64
SSBP1-210ENST00000481508 SLC2A13Q96QE2 648 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 MFSD1Q9H3U5 465 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 HAUS4Q9H6D7 363 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 ABCC13Q9NSE7 274 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 RBM12Q9NTZ6 932 aaKnown RBP11.04□□□□□ -0.64
SSBP1-210ENST00000481508 AIPL1Q9NZN9 384 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 DLGAP2Q9P1A6 1054 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 AGO1Q9UL18 857 aaKnown RBP11.04□□□□□ -0.64
SSBP1-210ENST00000481508 MYO6Q9UM54 1294 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 NDRG2Q9UN36 371 aaKnown RBP11.04□□□□□ -0.64
SSBP1-210ENST00000481508 CEP83Q9Y592 693 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 ITIH6Q6UXX5 1313 aa11.04□□□□□ -0.64
SSBP1-210ENST00000481508 MYO18AQ92614 2054 aaKnown RBP11.04□□□□□ -0.64
SSBP1-210ENST00000481508 A0A1W2PQJ5 194 aa11.03□□□□□ -0.64
SSBP1-210ENST00000481508 GOLGA8SH3BPF8 625 aa11.03□□□□□ -0.64
SSBP1-210ENST00000481508 DDX3XO00571 662 aaKnown RBP eCLIP11.03□□□□□ -0.641e-34■□□□□ 9.1
SSBP1-210ENST00000481508 TRIM24O15164 1050 aa11.03□□□□□ -0.64
SSBP1-210ENST00000481508 DAB1O75553 588 aa11.03□□□□□ -0.64
SSBP1-210ENST00000481508 PLEKP08567 350 aaPredicted RBP11.03□□□□□ -0.64
SSBP1-210ENST00000481508 AOC1P19801 751 aa11.03□□□□□ -0.64
SSBP1-210ENST00000481508 MMP8P22894 467 aa11.03□□□□□ -0.64
SSBP1-210ENST00000481508 CASP14P31944 242 aa11.03□□□□□ -0.64
SSBP1-210ENST00000481508 OPRD1P41143 372 aa11.03□□□□□ -0.64
SSBP1-210ENST00000481508 PRKCIP41743 596 aa11.03□□□□□ -0.64
SSBP1-210ENST00000481508 SLC6A11P48066 632 aa11.03□□□□□ -0.64
SSBP1-210ENST00000481508 SLC6A3Q01959 620 aa11.03□□□□□ -0.64
SSBP1-210ENST00000481508 CENPCQ03188 943 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms