RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 PLK2Q9NYY3 685 aa17.75■□□□□ 0.43
HSPG2-209ENST00000480900 CYTH4Q9UIA0 394 aa17.75■□□□□ 0.43
HSPG2-209ENST00000480900 AJAP1Q9UKB5 411 aaPredicted RBP17.75■□□□□ 0.43
HSPG2-209ENST00000480900 SLC27A6Q9Y2P4 619 aa17.75■□□□□ 0.43
HSPG2-209ENST00000480900 CKAP5Q14008 2032 aa17.75■□□□□ 0.43
HSPG2-209ENST00000480900 CACNA1AO00555 2505 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 PES1O00541 588 aaKnown RBP17.74■□□□□ 0.43
HSPG2-209ENST00000480900 MSI1O43347 362 aaKnown RBP17.74■□□□□ 0.43
HSPG2-209ENST00000480900 ADAM23O75077 832 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 IGLV3-27P01718 113 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 HNRNPLP14866 589 aaKnown RBP eCLIP17.74■□□□□ 0.43
HSPG2-209ENST00000480900 PTK2Q05397 1052 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 CDKAL1Q5VV42 579 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 TMEM92Q6UXU6 159 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 BEND5Q7L4P6 421 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 TMEM110Q86TL2 294 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 SCUBE3Q8IX30 993 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 FAM149B1Q96BN6 582 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 POLMQ9NP87 494 aaPredicted RBP17.74■□□□□ 0.43
HSPG2-209ENST00000480900 ANO10Q9NW15 660 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 STOML2Q9UJZ1 356 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 PCDHGC3Q9UN70 934 aa17.74■□□□□ 0.43
HSPG2-209ENST00000480900 E5RJQ4 531 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 PAPSS1O43252 624 aaPredicted RBP17.73■□□□□ 0.43
HSPG2-209ENST00000480900 ALDH1A2O94788 518 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 NCAM1P13591 858 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 RING1Q06587 406 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 KCNMA1Q12791 1236 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 PDCLQ13371 301 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 NNTQ13423 1086 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 STX1AQ16623 288 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 CCDC183Q5T5S1 534 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 ADGRF1Q5T601 910 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 NUGGCQ68CJ6 796 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 ANO7Q6IWH7 933 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 SASS6Q6UVJ0 657 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 TOGARAM2Q6ZUX3 1019 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 UNC45BQ8IWX7 931 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 FAM71AQ8IYT1 594 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 MDGA1Q8NFP4 955 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 LOXL4Q96JB6 756 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 ZC3H10Q96K80 434 aaKnown RBP17.73■□□□□ 0.43
HSPG2-209ENST00000480900 SLC2A11Q9BYW1 496 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 LHX5Q9H2C1 402 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 ZDHHC4Q9NPG8 344 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 HCN2Q9UL51 889 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 DCHS1Q96JQ0 3298 aa17.73■□□□□ 0.43
HSPG2-209ENST00000480900 CNOT1A5YKK6 2376 aaKnown RBP17.72■□□□□ 0.43
HSPG2-209ENST00000480900 PRRT4C9JH25 899 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 FOXN3O00409 490 aaPredicted RBP17.72■□□□□ 0.43
HSPG2-209ENST00000480900 GFRA2O00451 464 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 FYNP06241 537 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 TGM1P22735 817 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 NTSR1P30989 418 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 CLCN1P35523 988 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 BPIFB4P59827 614 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 MPPE1Q53F39 396 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 USP39Q53GS9 565 aaKnown RBP17.72■□□□□ 0.43
HSPG2-209ENST00000480900 KLHDC7AQ5VTJ3 777 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 EGFLAMQ63HQ2 1017 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 C11orf57Q6ZUT1 292 aaPredicted RBP17.72■□□□□ 0.43
HSPG2-209ENST00000480900 KBTBD6Q86V97 674 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 DQX1Q8TE96 717 aaKnown RBP17.72■□□□□ 0.43
HSPG2-209ENST00000480900 DDI1Q8WTU0 396 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 SERPINB11Q96P15 392 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 IRX2Q9BZI1 471 aaPredicted RBP17.72■□□□□ 0.43
HSPG2-209ENST00000480900 TAB2Q9NYJ8 693 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 FHOD1Q9Y613 1164 aa17.72■□□□□ 0.43
HSPG2-209ENST00000480900 SPTBN2O15020 2390 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 TPM2P07951 284 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 SLC11A2P49281 568 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 TBX4P57082 545 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 RAPGEF1Q13905 1077 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 DRAP1Q14919 205 aaPredicted RBP17.71■□□□□ 0.43
HSPG2-209ENST00000480900 KRT31Q15323 416 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 PLK5Q496M5 336 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 C11orf74Q86VG3 221 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 SLC47A2Q86VL8 602 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 WDTC1Q8N5D0 677 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 AZIN2Q96A70 460 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 PIWIL1Q96J94 861 aaKnown RBP17.71■□□□□ 0.43
HSPG2-209ENST00000480900 NOX5Q96PH1 765 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 CPXM1Q96SM3 734 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 LSM14BQ9BX40 385 aaKnown RBP17.71■□□□□ 0.43
HSPG2-209ENST00000480900 TPSD1Q9BZJ3 242 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 PARD6AQ9NPB6 346 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 USP18Q9UMW8 372 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 NAALADL1Q9UQQ1 740 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 TLR6Q9Y2C9 796 aa17.71■□□□□ 0.43
HSPG2-209ENST00000480900 TNRC6BQ9UPQ9 1833 aaKnown RBP17.7■□□□□ 0.42
HSPG2-209ENST00000480900 TCRBV21S2A2A0A5A6 115 aa17.7■□□□□ 0.42
HSPG2-209ENST00000480900 EPN2O95208 641 aa17.7■□□□□ 0.42
HSPG2-209ENST00000480900 PNMA6AP0CW24 399 aaPredicted RBP17.7■□□□□ 0.42
HSPG2-209ENST00000480900 HOXB2P14652 356 aa17.7■□□□□ 0.42
HSPG2-209ENST00000480900 UCHL3P15374 230 aa17.7■□□□□ 0.42
HSPG2-209ENST00000480900 HOXD9P28356 352 aaPredicted RBP17.7■□□□□ 0.42
HSPG2-209ENST00000480900 KRT9P35527 623 aa17.7■□□□□ 0.42
HSPG2-209ENST00000480900 YWHAZP63104 245 aaKnown RBP17.7■□□□□ 0.42
HSPG2-209ENST00000480900 MYL5Q02045 173 aa17.7■□□□□ 0.42
HSPG2-209ENST00000480900 LMNB2Q03252 620 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms