RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 OR8H2Q8N162 312 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 PCSK9Q8NBP7 692 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 NOD2Q9HC29 1040 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 ZCCHC17Q9NP64 241 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 TLR8Q9NR97 1041 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 C1QBPQ07021 282 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 KCNT1Q5JUK3 1230 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 IQGAP1P46940 1657 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 FER1L4A9Z1Z3 1794 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 MEI4A8MW99 385 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 ATMINO43313 823 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 GYPCP04921 128 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 S100GP29377 79 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 SARSP49591 514 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 ZNF157P51786 506 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 SCARA3Q6AZY7 606 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 SYTL1Q8IYJ3 562 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 B3GALNT2Q8NCR0 500 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 IGDCC4Q8TDY8 1250 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 CGRRF1Q99675 332 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 CRYL1Q9Y2S2 319 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 CDK7P50613 346 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 VAC14Q08AM6 782 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 PLCL1Q15111 1095 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 NEK5Q6P3R8 708 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 C1orf131Q8NDD1 294 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 RNASE11Q8TAA1 199 aaKnown RBP9.79□□□□□ -0.84
VEGFA-212ENST00000480614 C9orf16Q9BUW7 83 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 SLC40A1Q9NP59 571 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 HPS4Q9NQG7 708 aa9.79□□□□□ -0.84
VEGFA-212ENST00000480614 M0QYT0 321 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 CCDC130P13994 396 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 PRLRP16471 622 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 TFE3P19532 575 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 SKIV2L2P42285 1042 aaKnown RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 SLC29A2Q14542 456 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 KLHL12Q53G59 568 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 C11orf63Q6NUN7 778 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 COQ6Q9Y2Z9 468 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 TPRKBQ9Y3C4 175 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 MROH7Q68CQ1 1323 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 RTN3O95197 1032 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 MYL4P12829 197 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 MSH3P20585 1137 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 PTPN3P26045 913 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 LAYNQ6UX15 382 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 STK40Q8N2I9 435 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 TCF7L2Q9NQB0 619 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 AGPAT5Q9NUQ2 364 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 SPATA2Q9UM82 520 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 DUSP12Q9UNI6 340 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 ITGAXP20702 1163 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 HIRAP54198 1017 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 CCZ1BP86790 482 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 CCZ1P86791 482 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 FRG1Q14331 258 aaKnown RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 ZDHHC17Q8IUH5 632 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 SLC39A8Q9C0K1 460 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 RACGAP1Q9H0H5 632 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 EPB41L4BQ9H329 900 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 ADPRHL2Q9NX46 363 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 RABGEF1Q9UJ41 708 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 DCDC2CA8MYV0 355 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 OPLAHO14841 1288 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 IRAK1P51617 712 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 STK4Q13043 487 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 MTF1Q14872 753 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 NFIXQ14938 502 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 SLC26A11Q86WA9 606 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 PPLO60437 1756 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 ZNF609O15014 1411 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 ACADMP11310 421 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 BSNDQ8WZ55 320 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 UGT2B28Q9BY64 529 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 NMRAL1Q9HBL8 299 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 RXFP1Q9HBX9 757 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 KCNH7Q9NS40 1196 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 ITGA11Q9UKX5 1188 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 SNX13Q9Y5W8 968 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 USP27XA6NNY8 438 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 CYB561D2O14569 222 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 ATP6V1B2P21281 511 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 NFYCQ13952 458 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 SCARF1Q14162 830 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 BRINP3Q76B58 766 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 CORO2BQ9UQ03 480 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 CCL15-CCL14A0A0B4J2E2 113 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 FAM25AB3EWG3 89 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 FAM25CB3EWG5 89 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 FAM25GB3EWG6 89 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 SNPHO15079 494 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 MLH1P40692 756 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 MYL6P60660 151 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 EPS8Q12929 822 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 NKX1-1Q15270 411 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 CCL15Q16663 113 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 PLEKHA7Q6IQ23 1121 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 CARNMT1Q8N4J0 409 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms