RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 PAIP1Q9H074 479 aaKnown RBP10.98□□□□□ -0.65
SIK3-210ENST00000480468 CLK4Q9HAZ1 481 aaKnown RBP10.98□□□□□ -0.65
SIK3-210ENST00000480468 TOPORSQ9NS56 1045 aaPredicted RBP10.98□□□□□ -0.65
SIK3-210ENST00000480468 DOLKQ9UPQ8 538 aa10.98□□□□□ -0.65
SIK3-210ENST00000480468 SCN4AP35499 1836 aa10.98□□□□□ -0.65
SIK3-210ENST00000480468 A0A087WXM4 84 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 LOC100653049A0A140TA62 436 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 CXorf49A8MYA2 514 aaPredicted RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 K7EPI3 171 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 PSMD12O00232 456 aaPredicted RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 SLC22A2O15244 555 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 LYPLA1O75608 230 aaPredicted RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 SULT1C4O75897 302 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 KRT34O76011 436 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 HARS2P49590 506 aaKnown RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 NLRP11P59045 1033 aaKnown RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 ITPK1Q13572 414 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 MOGQ16653 247 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 MGAT5BQ3V5L5 792 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 SLFN13Q68D06 897 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 SLC2A7Q6PXP3 512 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 UNC45BQ8IWX7 931 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 KYQ8NBH2 561 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 TBC1D15Q8TC07 691 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 EFHD2Q96C19 240 aaPredicted RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 C12orf43Q96C57 262 aaKnown RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 CNDP1Q96KN2 507 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 ZNF512Q96ME7 567 aaPredicted RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 SORT1Q99523 831 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 HEPHQ9BQS7 1158 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 SHCBP1LQ9BZQ2 653 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 POPDC2Q9HBU9 364 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 GIN1Q9NXP7 522 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 CNTN6Q9UQ52 1028 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 F8VP50 259 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 XPO1O14980 1071 aaKnown RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 CST8O60676 142 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 ZBTB11O95625 1053 aaPredicted RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 APOEP02649 317 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 TFPTP0C1Z6 253 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 NCF2P19878 526 aaPredicted RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 TM4SF1P30408 202 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 THOP1P52888 689 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 YWHAZP63104 245 aaKnown RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 CNTN2Q02246 1040 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 CEP55Q53EZ4 464 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 TXNRD3NBQ6F5E7 133 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 SNRNP48Q6IEG0 339 aaKnown RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 FASTKD5Q7L8L6 764 aaKnown RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 SETD3Q86TU7 594 aaPredicted RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 CLVS1Q8IUQ0 354 aaPredicted RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 PDCD6IPQ8WUM4 868 aaKnown RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 THAP11Q96EK4 314 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 CFAP36Q96G28 342 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 OLFM1Q99784 485 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 ANKRD60Q9BZ19 345 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 PDZD7Q9H5P4 517 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 TUT1Q9H6E5 874 aaKnown RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 XPNPEP1Q9NQW7 623 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 HOMER2Q9NSB8 354 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 NYAP2Q9P242 653 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 ZC3H7BQ9UGR2 993 aaKnown RBP10.97□□□□□ -0.65
SIK3-210ENST00000480468 AGTPBP1Q9UPW5 1226 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 GIT1Q9Y2X7 761 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 TSC22D4Q9Y3Q8 395 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 AP4S1Q9Y587 144 aa10.97□□□□□ -0.65
SIK3-210ENST00000480468 HMX2A2RU54 273 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 C7orf72A4D263 438 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 TRIM64A6NGJ6 449 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 FAM159BA6NKW6 160 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 APOC4-APOC2K7ER74 178 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 DCXO43602 365 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 CNOT3O75175 753 aaKnown RBP10.96□□□□□ -0.65
SIK3-210ENST00000480468 GLRA3O75311 464 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 APOC2P02655 101 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 CFHP08603 1231 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 KRT7P08729 469 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 IL1R1P14778 569 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 XRCC1P18887 633 aaPredicted RBP10.96□□□□□ -0.65
SIK3-210ENST00000480468 GNA15P30679 374 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 BMPR2Q13873 1038 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 IKBKEQ14164 716 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 PPP2R5DQ14738 602 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 INAQ16352 499 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 WDR44Q5JSH3 913 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 KRT80Q6KB66 452 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 DNAJC24Q6P3W2 148 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 PTF1AQ7RTS3 328 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 MAP4K3Q8IVH8 894 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 FIBCD1Q8N539 461 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 FAM71DQ8N9W8 422 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 POMGNT1Q8WZA1 660 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 STARD8Q92502 1023 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 MMP19Q99542 508 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 PI4K2AQ9BTU6 479 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 TEKT3Q9BXF9 490 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 CAAP1Q9H8G2 361 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 SMYD2Q9NRG4 433 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 EBF1Q9UH73 591 aa10.96□□□□□ -0.65
SIK3-210ENST00000480468 RGPD3A6NKT7 1758 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms