RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 MARCH2Q9P0N8 246 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 TFR2Q9UP52 801 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 REXO2Q9Y3B8 237 aaKnown RBP12.77□□□□□ -0.37
TRA2B-212ENST00000480461 DENND4CQ5VZ89 1909 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 CFAP47Q6ZTR5 3102 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 SPTBN2O15020 2390 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 SART1O43290 800 aaKnown RBP12.76□□□□□ -0.37
TRA2B-212ENST00000480461 MSI1O43347 362 aaKnown RBP12.76□□□□□ -0.37
TRA2B-212ENST00000480461 AKR1B10O60218 316 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 HSF2BPO75031 334 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 ECI2O75521 394 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 LCA5LO95447 670 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 CALB1P05937 261 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 SNX16P57768 344 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 GRM2Q14416 872 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 ZNF77Q15935 545 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 CCDC14Q49A88 953 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 TOGARAM2Q6ZUX3 1019 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 ARCQ7LC44 396 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 BNIPLQ7Z465 357 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 TMTC1Q8IUR5 882 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 MFSD6LQ8IWD5 586 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 CELF5Q8N6W0 485 aaKnown RBP12.76□□□□□ -0.37
TRA2B-212ENST00000480461 C3orf20Q8ND61 904 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 P2RY11Q96G91 374 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 PDLIM2Q96JY6 352 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 ZFYVE19Q96K21 471 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 NPY6RQ99463 290 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 BAG1Q99933 345 aaPredicted RBP12.76□□□□□ -0.37
TRA2B-212ENST00000480461 TBC1D17Q9HA65 648 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 DLGAP2Q9P1A6 1054 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 CFAP97Q9P2B7 532 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 IGSF9Q9P2J2 1179 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 WNT16Q9UBV4 365 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 ZMYM5Q9UJ78 669 aa12.76□□□□□ -0.37
TRA2B-212ENST00000480461 EPN1Q9Y6I3 576 aaPredicted RBP12.76□□□□□ -0.37
TRA2B-212ENST00000480461 SLC12A8A0AV02 714 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 RCCD1A6NED2 376 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 TMEM191CA6NGB0 347 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 OTOL1A6NHN0 477 aaPredicted RBP12.75□□□□□ -0.37
TRA2B-212ENST00000480461 C2CD4BA6NLJ0 364 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 I6L893 689 aaPredicted RBP12.75□□□□□ -0.37
TRA2B-212ENST00000480461 STK25O00506 426 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 DAB1O75553 588 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 STC2O76061 302 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 IGLV3-27P01718 113 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 CYP1A2P05177 515 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 DCNP07585 359 aaKnown RBP12.75□□□□□ -0.37
TRA2B-212ENST00000480461 HMBSP08397 361 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 SP9P0CG40 484 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 KRT3P12035 628 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 TCF3P15923 654 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 ABCB4P21439 1286 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 NOS2P35228 1153 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 MATKP42679 507 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 MAP1BP46821 2468 aaKnown RBP12.75□□□□□ -0.37
TRA2B-212ENST00000480461 ATXN1P54253 815 aaKnown RBP12.75□□□□□ -0.37
TRA2B-212ENST00000480461 GPC5P78333 572 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 FCHO2Q0JRZ9 810 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 RSRC2Q7L4I2 434 aaKnown RBP12.75□□□□□ -0.37
TRA2B-212ENST00000480461 TAC4Q86UU9 113 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 VPS36Q86VN1 386 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 LRRC8AQ8IWT6 810 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 CCDC170Q8IYT3 715 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 ARFGAP1Q8N6T3 406 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 SUMF1Q8NBK3 374 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 TTC16Q8NEE8 873 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 RNF139Q8WU17 664 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 RXFP2Q8WXD0 754 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 SLC39A13Q96H72 371 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 CFAP57Q96MR6 1250 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 TBCBQ99426 244 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 FAM83CQ9BQN1 747 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 ANLNQ9NQW6 1124 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 OBP2AQ9NY56 170 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRA2B-212ENST00000480461 WDR35Q9P2L0 1181 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 MYO1AQ9UBC5 1043 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 CNOT8Q9UFF9 292 aaKnown RBP12.75□□□□□ -0.37
TRA2B-212ENST00000480461 RASAL2Q9UJF2 1139 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 STRIP2Q9ULQ0 834 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 CA14Q9ULX7 337 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 CHD6Q8TD26 2715 aa12.75□□□□□ -0.37
TRA2B-212ENST00000480461 USP24Q9UPU5 2620 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 A0A0U1RQJ8 604 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 ANKRD62A6NC57 917 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 ARNTLO00327 626 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 CAPN9O14815 690 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 ENDOD1O94919 500 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 NDUFA10O95299 355 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 TRUB2O95900 331 aaKnown RBP12.74□□□□□ -0.37
TRA2B-212ENST00000480461 IRF1P10914 325 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 PDGFRAP16234 1089 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 PSMC3P17980 439 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 ZNF252P-AS1Q0IIN9 211 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 USP4Q13107 963 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 TRIP4Q15650 581 aaPredicted RBP12.74□□□□□ -0.37
TRA2B-212ENST00000480461 C15orf59Q2T9L4 293 aaPredicted RBP12.74□□□□□ -0.37
TRA2B-212ENST00000480461 ARTNQ5T4W7 220 aa12.74□□□□□ -0.37
TRA2B-212ENST00000480461 TRIM68Q6AZZ1 485 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms