RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 MTX3Q5HYI7 312 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 TMC5Q6UXY8 1006 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 PRR23CQ6ZRP0 262 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 EID3Q8N140 333 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 DEPDC4Q8N2C3 294 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 STK40Q8N2I9 435 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 AGBL3Q8NEM8 1001 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 TSPAN14Q8NG11 270 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 SLC7A14Q8TBB6 771 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 SIK2Q9H0K1 926 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 DNAJC18Q9H819 358 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 TMEM216Q9P0N5 145 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 RCOR3Q9P2K3 495 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 ITGA11Q9UKX5 1188 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 DSEQ9UL01 958 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 A0A096LPK6 155 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 PDZK1P1A8MUH7 402 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 DLGAP3O95886 979 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 PGK2P07205 417 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 CCDC166P0CW27 439 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 HARS2P49590 506 aaKnown RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 SULT1E1P49888 294 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 DRICH1Q6PGQ1 229 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 CLVS1Q8IUQ0 354 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 NUP93Q8N1F7 819 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 CCDC24Q8N4L8 307 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM45AQ8TCE6 357 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 SLC20A1Q8WUM9 679 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 BAP1Q92560 729 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 NDNQ99608 321 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 TDRD3Q9H7E2 651 aaKnown RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 RAVER2Q9HCJ3 691 aaKnown RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 RHBDL2Q9NX52 303 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 LGALS13Q9UHV8 139 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 MAGED2Q9UNF1 606 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 RAP2CQ9Y3L5 183 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 RWDD3Q9Y3V2 267 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 PDE2AO00408 941 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 RHOBTB1O94844 696 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 ETS1P14921 441 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 NPTX2P47972 431 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 PRKG2Q13237 762 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 DPYSQ14117 519 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 NOTUMQ6P988 496 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 MPZL3Q6UWV2 235 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 CBWD2Q8IUF1 395 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 CYP4Z2PQ8N1L4 340 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 TSEN2Q8NCE0 465 aaKnown RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 KIAA0895Q8NCT3 520 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 EPS8L1Q8TE68 723 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 AGBL1Q96MI9 1066 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 OSBPL10Q9BXB5 764 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 ST6GALNAC4Q9H4F1 302 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 ANAPC2Q9UJX6 822 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 TAF6LQ9Y6J9 622 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 TMEM191CA6NGB0 347 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 PRPF4O43172 522 aaKnown RBP eCLIP6.31□□□□□ -1.41e-6■■□□□ 11.8
PRPF4B-205ENST00000480058 ITGAVP06756 1048 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 MMP10P09238 476 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 CCNA2P20248 432 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 PTPN7P35236 360 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 ACOT2P49753 483 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 AIF1P55008 147 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 CDK18Q07002 472 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 TNK2Q07912 1038 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 KCNA1Q09470 495 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 AGKQ53H12 422 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 KHDRBS2Q5VWX1 349 aaKnown RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 RETSATQ6NUM9 610 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 ABRAXAS1Q6UWZ7 409 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 ZNF572Q7Z3I7 529 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 CHSY1Q86X52 802 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 PHF13Q86YI8 300 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 PURBQ96QR8 312 aaKnown RBP6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 UBXN6Q9BZV1 441 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 DMTF1Q9Y222 760 aa6.31□□□□□ -1.4
PRPF4B-205ENST00000480058 PSMD12O00232 456 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PMM2O15305 246 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 VIL1P09327 827 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 TXNP10599 105 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 MAPK8P45983 427 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 ACADVLP49748 655 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 HPCAP84074 193 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 POU5F1Q01860 360 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 BTKQ06187 659 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 KLHL12Q53G59 568 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 C11orf88Q6PI97 169 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PSTKQ8IV42 348 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM71AQ8IYT1 594 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 KRT78Q8N1N4 520 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 OR56A4Q8NGH8 313 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 NMD3Q96D46 503 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 SPATA33Q96N06 139 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PNMA5Q96PV4 448 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 TCF12Q99081 682 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 MTMR12Q9C0I1 747 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 ENTPD7Q9NQZ7 604 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 CD274Q9NZQ7 290 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 AP4E1Q9UPM8 1137 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 GSAPA4D1B5 854 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms