RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 MCL1Q07820 350 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 ZNF211Q13398 564 aaPredicted RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 FBXL19Q6PCT2 694 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 CDKL3Q8IVW4 592 aaPredicted RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 EDEM1Q92611 657 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 FOPNLQ96NB1 174 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 GOLGA2P5Q9HBQ8 144 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 SIX2Q9NPC8 291 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 INTS9Q9NV88 658 aaKnown RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 NOVA2Q9UNW9 492 aaKnown RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 MYH4Q9Y623 1939 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 DDX60LQ5H9U9 1706 aaKnown RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 GRXCR1A8MXD5 290 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 H3BQF6 201 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 AGTP01019 485 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 LTFP02788 710 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 GALTP07902 379 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 PAEPP09466 180 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 COPS2P61201 443 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 YWHAZP63104 245 aaKnown RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 AP1B1Q10567 949 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 PEX6Q13608 980 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 LAMB3Q13751 1172 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 TCEAL1Q15170 157 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 PDGFRLQ15198 375 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 ZACNQ401N2 412 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 KDM7AQ6ZMT4 941 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.16□□□□□ -1.42
CPS1-207ENST00000479988 PRR23CQ6ZRP0 262 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 MON1AQ86VX9 555 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 ZDHHC17Q8IUH5 632 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 DAW1Q8N136 415 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 TAB3Q8N5C8 712 aaPredicted RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 TBC1D19Q8N5T2 526 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 LRRC57Q8N9N7 239 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 KLHDC9Q8NEP7 349 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 LNX1Q8TBB1 728 aaPredicted RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 BORCS6Q96GS4 357 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 SNF8Q96H20 258 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 GPR63Q9BZJ6 419 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 ARHGAP28Q9P2N2 729 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 SLC30A1Q9Y6M5 507 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 EIF3HO15372 352 aaKnown RBP eCLIP6.16□□□□□ -1.42
CPS1-207ENST00000479988 MTSS1O43312 755 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 CFIP05156 583 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 CYP1A2P05177 515 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 COILP38432 576 aaPredicted RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 PRAMEP78395 509 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 EIF2B5Q13144 721 aaKnown RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 TMED2Q15363 201 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 GRASPQ7Z6J2 395 aaPredicted RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 RPAINQ86UA6 219 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 LGI2Q8N0V4 545 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 FEZF2Q8TBJ5 459 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 BPIFB1Q8TDL5 484 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 GLMNQ92990 594 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 FAXDC2Q96IV6 333 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 VPS39Q96JC1 886 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 KLC2Q9H0B6 622 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 ATP13A1Q9HD20 1204 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 ERVK-5Q9HDB9 667 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 OSGEPQ9NPF4 335 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 RRP15Q9Y3B9 282 aaKnown RBP6.16□□□□□ -1.42
CPS1-207ENST00000479988 YIPF1Q9Y548 306 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 COL4A1P02462 1669 aa6.16□□□□□ -1.42
CPS1-207ENST00000479988 ECM29Q5VYK3 1845 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 SMIM23A6NLE4 172 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 PROSCO94903 275 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 IGSF6O95976 241 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 HOXD13P35453 343 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 CCT5P48643 541 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 DHPSP49366 369 aaPredicted RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 IRAK1P51617 712 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 MCCD1P59942 119 aaPredicted RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 HIC1Q14526 733 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 ARHGEF19Q8IW93 802 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 CELF5Q8N6W0 485 aaKnown RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 SLC30A5Q8TAD4 765 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 PPP4R1Q8TF05 950 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 FUBP3Q96I24 572 aaKnown RBP eCLIP6.15□□□□□ -1.42
CPS1-207ENST00000479988 ACBD6Q9BR61 282 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 DDX23Q9BUQ8 820 aaKnown RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 ULBP1Q9BZM6 244 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 PABPC3Q9H361 631 aaKnown RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 VPS37BQ9H9H4 285 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 SCUBE2Q9NQ36 999 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 SMARCAL1Q9NZC9 954 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 WHRNQ9P202 907 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 SUN2Q9UH99 717 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 ARIH1Q9Y4X5 557 aaPredicted RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 A0A0B4J269 797 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 ANKRD63C9JTQ0 380 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 ZNF623O75123 536 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 MMEP08473 750 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 TKTP29401 623 aaKnown RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 MDH1P40925 334 aaKnown RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 GARSP41250 739 aaKnown RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 BASP1P80723 227 aaKnown RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 MRPS25P82663 173 aaKnown RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 SKOR1P84550 965 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms