RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 AZIN2Q96A70 460 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 SLC39A13Q96H72 371 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 OSBPL6Q9BZF3 934 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 LTB4R2Q9NPC1 389 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 SPHK2Q9NRA0 654 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 ABHD10Q9NUJ1 306 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 ADAMTS1Q9UHI8 967 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 TMEM59LQ9UK28 342 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 AGO1Q9UL18 857 aaKnown RBP11.28□□□□□ -0.6
ATG4B-219ENST00000479941 TICRRQ7Z2Z1 1910 aa11.27□□□□□ -0.6
ATG4B-219ENST00000479941 COL4A2P08572 1712 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 SHISA7A6NL88 538 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 TMCO5BA8MYB1 307 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 AKR1B15C9JRZ8 316 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-219ENST00000479941 NCAM2O15394 837 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 RTN2O75298 545 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 F9P00740 461 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 SLC2A3P11169 496 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 KRT3P12035 628 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 AOC1P19801 751 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 SOX9P48436 509 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 SLC11A2P49281 568 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 EIF4EBP2Q13542 120 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-219ENST00000479941 SLC25A52Q3SY17 297 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 LY6G5CQ5SRR4 150 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 ASTLQ6HA08 431 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-219ENST00000479941 MCOLN2Q8IZK6 566 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 CPXM2Q8N436 756 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 NT5C3BQ969T7 300 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 PGAP3Q96FM1 320 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-219ENST00000479941 FCRL2Q96LA5 508 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-219ENST00000479941 NPY6RQ99463 290 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 LRFN3Q9BTN0 628 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.27□□□□□ -0.61
ATG4B-219ENST00000479941 FAM204AQ9H8W3 233 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 METTL5Q9NRN9 209 aaKnown RBP11.27□□□□□ -0.61
ATG4B-219ENST00000479941 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.27□□□□□ -0.61
ATG4B-219ENST00000479941 DDIT4Q9NX09 232 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 TAS2R14Q9NYV8 317 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 MARK1Q9P0L2 795 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 ARHGAP20Q9P2F6 1191 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 STOML2Q9UJZ1 356 aa11.27□□□□□ -0.61
ATG4B-219ENST00000479941 SSU72P8A0A1W2PR75 194 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 SIGLEC16A6NMB1 481 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 FAM170BA6NMN3 283 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 M0QYT0 321 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 TRDMT1O14717 391 aaKnown RBP11.26□□□□□ -0.61
ATG4B-219ENST00000479941 HOXC11O43248 304 aaPredicted RBP11.26□□□□□ -0.61
ATG4B-219ENST00000479941 ACSL4O60488 711 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 APOEP02649 317 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 FTLP02792 175 aaPredicted RBP11.26□□□□□ -0.61
ATG4B-219ENST00000479941 PLEKP08567 350 aaPredicted RBP11.26□□□□□ -0.61
ATG4B-219ENST00000479941 MYBL1P10243 752 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 ADH5P11766 374 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 CD72P21854 359 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 RRM1P23921 792 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 CCR1P32246 355 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 FLT3P36888 993 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 EIF2DP41214 584 aaKnown RBP11.26□□□□□ -0.61
ATG4B-219ENST00000479941 SULT1E1P49888 294 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 ADKP55263 362 aaKnown RBP11.26□□□□□ -0.61
ATG4B-219ENST00000479941 PITX1P78337 314 aaPredicted RBP11.26□□□□□ -0.61
ATG4B-219ENST00000479941 MTA1Q13330 715 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 PPP2R5DQ14738 602 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 UBXN2BQ14CS0 331 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 ANO4Q32M45 955 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 ADGRF1Q5T601 910 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 CWF19L1Q69YN2 538 aaKnown RBP11.26□□□□□ -0.61
ATG4B-219ENST00000479941 DNAJC24Q6P3W2 148 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 WDR59Q6PJI9 974 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 TXNDC11Q6PKC3 985 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 SND1Q7KZF4 910 aaKnown RBP eCLIP11.26□□□□□ -0.61
ATG4B-219ENST00000479941 TMEM25Q86YD3 366 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 FAM217AQ8IXS0 508 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 PJA1Q8NG27 643 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 CHFRQ96EP1 664 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 TRIM11Q96F44 468 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 P2RY13Q9BPV8 354 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 DDX50Q9BQ39 737 aaKnown RBP11.26□□□□□ -0.61
ATG4B-219ENST00000479941 SELENOOQ9BVL4 669 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 IRX2Q9BZI1 471 aaPredicted RBP11.26□□□□□ -0.61
ATG4B-219ENST00000479941 FOXQ1Q9C009 403 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 ISCUQ9H1K1 167 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 SLC12A6Q9UHW9 1150 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 SIT1Q9Y3P8 196 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 PAXBP1Q9Y5B6 917 aa11.26□□□□□ -0.61
ATG4B-219ENST00000479941 SYNJ2BP-COX16A0A087WUM0 186 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 A0A087X0T9 212 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 TCRBV5S1A1TA0A578 114 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 ANKRD62A6NC57 917 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 C2CD4BA6NLJ0 364 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-219ENST00000479941 CYBBP04839 570 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 FAM228BP0C875 321 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 PDGFRAP16234 1089 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 ABCB4P21439 1286 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 DRD1P21728 446 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 TARSP26639 723 aaKnown RBP11.25□□□□□ -0.61
ATG4B-219ENST00000479941 SDC4P31431 198 aa11.25□□□□□ -0.61
ATG4B-219ENST00000479941 EIF4A3P38919 411 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms