RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 MYO9BQ13459 2157 aa6.11□□□□□ -1.43
UPF3A-205ENST00000479712 NCAPD2Q15021 1401 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 PFASO15067 1338 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 CCDC78A2IDD5 438 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 OTOL1A6NHN0 477 aaPredicted RBP6.1□□□□□ -1.43
UPF3A-205ENST00000479712 AQP7P3A6NL99 342 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 ERVV-2B6SEH9 535 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 DIRC3C9JPN6 131 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 ZNF185O15231 689 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 RRP9O43818 475 aaKnown RBP6.1□□□□□ -1.43
UPF3A-205ENST00000479712 ERN1O75460 977 aaKnown RBP6.1□□□□□ -1.43
UPF3A-205ENST00000479712 SOAT2O75908 522 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 PIAS2O75928 621 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 GPANK1O95872 356 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 HSD3B1P14060 373 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 KCNA2P16389 499 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 EGR1P18146 543 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 ITGALP20701 1170 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 LRPAP1P30533 357 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 PRMT2P55345 433 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 OCA2Q04671 838 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 FOXO1Q12778 655 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 PPFIA1Q13136 1202 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 NPY5RQ15761 445 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 AAK1Q2M2I8 961 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 ARHGAP15Q53QZ3 475 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 FBLN7Q53RD9 439 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 ALFQ53S48 1182 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 ARL6IP4Q66PJ3 421 aaKnown RBP6.1□□□□□ -1.43
UPF3A-205ENST00000479712 KIAA0408Q6ZU52 694 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 ARMC9Q7Z3E5 817 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 KCTD20Q7Z5Y7 419 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 BPIFB1Q8TDL5 484 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 ZNF483Q8TF39 744 aaPredicted RBP6.1□□□□□ -1.43
UPF3A-205ENST00000479712 STYXQ8WUJ0 223 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 DCLRE1CQ96SD1 692 aaKnown RBP6.1□□□□□ -1.43
UPF3A-205ENST00000479712 SORBS1Q9BX66 1292 aaKnown RBP6.1□□□□□ -1.43
UPF3A-205ENST00000479712 PCDHAC1Q9H158 963 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 FAM83DQ9H4H8 585 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 DNMT3BQ9UBC3 853 aaKnown RBP6.1□□□□□ -1.43
UPF3A-205ENST00000479712 DKK4Q9UBT3 224 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 NEU2Q9Y3R4 380 aa6.1□□□□□ -1.43
UPF3A-205ENST00000479712 NAV2Q8IVL1 2488 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 PLXNA3P51805 1871 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 LTBP2Q14767 1821 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 USP24Q9UPU5 2620 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 DBX1A6NMT0 343 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 PATE3B3GLJ2 98 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 M0R3H8 397 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 SUN1O94901 812 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 RASAL1O95294 804 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 TNFRSF6BO95407 300 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 DHRS4L1P0CG22 281 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 ZSCAN22P10073 491 aaPredicted RBP6.09□□□□□ -1.43
UPF3A-205ENST00000479712 ACO1P21399 889 aaKnown RBP6.09□□□□□ -1.43
UPF3A-205ENST00000479712 ATICP31939 592 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 NF2P35240 595 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 PSMC4P43686 418 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 EIF5P55010 431 aaKnown RBP6.09□□□□□ -1.43
UPF3A-205ENST00000479712 MC2RQ01718 297 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 PRKCZQ05513 592 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 KCNAB1Q14722 419 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 POSTNQ15063 836 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 MAPKAPK3Q16644 382 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 LRRC26Q2I0M4 334 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 ZIK1Q3SY52 487 aaPredicted RBP6.09□□□□□ -1.43
UPF3A-205ENST00000479712 PDCD4Q53EL6 469 aaKnown RBP6.09□□□□□ -1.43
UPF3A-205ENST00000479712 ZFYVE27Q5T4F4 411 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 FAXCQ5TGI0 409 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 TMEM108Q6UXF1 575 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 CLNKQ7Z7G1 428 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 KRT73Q86Y46 540 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 ANKRD18AQ8IVF6 992 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 CCDC28AQ8IWP9 274 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 SLC46A2Q9BY10 475 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 XYLT2Q9H1B5 865 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 DBNDD1Q9H9R9 158 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 TMEM8AQ9HCN3 771 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 CASS4Q9NQ75 786 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.09□□□□□ -1.43
UPF3A-205ENST00000479712 MTO1Q9Y2Z2 717 aaKnown RBP6.09□□□□□ -1.43
UPF3A-205ENST00000479712 ZNF292O60281 2723 aa6.09□□□□□ -1.43
UPF3A-205ENST00000479712 COL3A1P02461 1466 aaPredicted RBP6.09□□□□□ -1.44
UPF3A-205ENST00000479712 RTL1A6NKG5 1358 aa6.08□□□□□ -1.44
UPF3A-205ENST00000479712 E7ENX8 843 aa6.08□□□□□ -1.44
UPF3A-205ENST00000479712 RGS10O43665 173 aa6.08□□□□□ -1.44
UPF3A-205ENST00000479712 ASNA1O43681 348 aa6.08□□□□□ -1.44
UPF3A-205ENST00000479712 WDHD1O75717 1129 aaPredicted RBP6.08□□□□□ -1.44
UPF3A-205ENST00000479712 CAMTA2O94983 1202 aa6.08□□□□□ -1.44
UPF3A-205ENST00000479712 ITGA5P08648 1049 aa6.08□□□□□ -1.44
UPF3A-205ENST00000479712 HIBADHP31937 336 aaKnown RBP6.08□□□□□ -1.44
UPF3A-205ENST00000479712 ANXA11P50995 505 aaKnown RBP6.08□□□□□ -1.44
UPF3A-205ENST00000479712 SCNN1GP51170 649 aa6.08□□□□□ -1.44
UPF3A-205ENST00000479712 DGKEP52429 567 aa6.08□□□□□ -1.44
UPF3A-205ENST00000479712 PRKAG1P54619 331 aa6.08□□□□□ -1.44
UPF3A-205ENST00000479712 TAP2Q03519 686 aa6.08□□□□□ -1.44
UPF3A-205ENST00000479712 MYO1EQ12965 1108 aa6.08□□□□□ -1.44
UPF3A-205ENST00000479712 CNGB1Q14028 1251 aaPredicted RBP6.08□□□□□ -1.44
UPF3A-205ENST00000479712 SLC5A9Q2M3M2 681 aa6.08□□□□□ -1.44
UPF3A-205ENST00000479712 ZNF750Q32MQ0 723 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms