RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 CAPN11Q9UMQ6 739 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 LUC7L2Q9Y383 392 aaKnown RBP21.34■■□□□ 1.01
VARS-224ENST00000479051 TRUB2O95900 331 aaKnown RBP21.33■■□□□ 1.01
VARS-224ENST00000479051 IGLV3-27P01718 113 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 APOEP02649 317 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 CALB1P05937 261 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 TPM1P09493 284 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 NOS2P35228 1153 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 RNASE9P60153 205 aaKnown RBP21.33■■□□□ 1.01
VARS-224ENST00000479051 FBXO43Q4G163 708 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 TPGS1Q6ZTW0 290 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 ZNF687Q8N1G0 1237 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 CPXM2Q8N436 756 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 SLC30A5Q8TAD4 765 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 ADAM32Q8TC27 787 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 CPLX3Q8WVH0 158 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 SYN2Q92777 582 aaPredicted RBP21.33■■□□□ 1.01
VARS-224ENST00000479051 CHFRQ96EP1 664 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 PCDHB18PQ96TA0 734 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 DDX50Q9BQ39 737 aaKnown RBP21.33■■□□□ 1.01
VARS-224ENST00000479051 C11orf70Q9BRQ4 267 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 TMEM51Q9NW97 253 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.33■■□□□ 1.01
VARS-224ENST00000479051 ADAM22Q9P0K1 906 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 MARK1Q9P0L2 795 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 DLGAP2Q9P1A6 1054 aa21.33■■□□□ 1.01
VARS-224ENST00000479051 FAM170AA1A519 330 aa21.32■■□□□ 1
VARS-224ENST00000479051 NEDD8-MDP1E9PL57 170 aa21.32■■□□□ 1
VARS-224ENST00000479051 GOLGA8SH3BPF8 625 aa21.32■■□□□ 1
VARS-224ENST00000479051 IRAK2O43187 625 aa21.32■■□□□ 1
VARS-224ENST00000479051 GALR2O43603 387 aaPredicted RBP21.32■■□□□ 1
VARS-224ENST00000479051 SLC2A3P11169 496 aa21.32■■□□□ 1
VARS-224ENST00000479051 COL9A1P20849 921 aa21.32■■□□□ 1
VARS-224ENST00000479051 OPRD1P41143 372 aa21.32■■□□□ 1
VARS-224ENST00000479051 PRKCIP41743 596 aa21.32■■□□□ 1
VARS-224ENST00000479051 MATKP42679 507 aa21.32■■□□□ 1
VARS-224ENST00000479051 CCINQ13939 588 aa21.32■■□□□ 1
VARS-224ENST00000479051 SPECC1LQ69YQ0 1117 aa21.32■■□□□ 1
VARS-224ENST00000479051 NUDT18Q6ZVK8 323 aa21.32■■□□□ 1
VARS-224ENST00000479051 PHF13Q86YI8 300 aaPredicted RBP21.32■■□□□ 1
VARS-224ENST00000479051 PNKPQ96T60 521 aa21.32■■□□□ 1
VARS-224ENST00000479051 CHRDQ9H2X0 955 aa21.32■■□□□ 1
VARS-224ENST00000479051 HAUS4Q9H6D7 363 aa21.32■■□□□ 1
VARS-224ENST00000479051 SPATA6Q9NWH7 488 aaPredicted RBP21.32■■□□□ 1
VARS-224ENST00000479051 SLC12A6Q9UHW9 1150 aa21.32■■□□□ 1
VARS-224ENST00000479051 BZW2Q9Y6E2 419 aaKnown RBP21.32■■□□□ 1
VARS-224ENST00000479051 ZNF318Q5VUA4 2279 aa21.31■■□□□ 1
VARS-224ENST00000479051 APODP05090 189 aa21.31■■□□□ 1
VARS-224ENST00000479051 TYRP14679 529 aa21.31■■□□□ 1
VARS-224ENST00000479051 MTA1Q13330 715 aa21.31■■□□□ 1
VARS-224ENST00000479051 GAB4Q2WGN9 574 aa21.31■■□□□ 1
VARS-224ENST00000479051 C2CD6Q53TS8 623 aa21.31■■□□□ 1
VARS-224ENST00000479051 TDRD12Q587J7 1177 aaKnown RBP21.31■■□□□ 1
VARS-224ENST00000479051 ADGRF1Q5T601 910 aa21.31■■□□□ 1
VARS-224ENST00000479051 FSTL4Q6MZW2 842 aa21.31■■□□□ 1
VARS-224ENST00000479051 VPS36Q86VN1 386 aa21.31■■□□□ 1
VARS-224ENST00000479051 FAM217AQ8IXS0 508 aa21.31■■□□□ 1
VARS-224ENST00000479051 RNF34Q969K3 372 aa21.31■■□□□ 1
VARS-224ENST00000479051 AZIN2Q96A70 460 aa21.31■■□□□ 1
VARS-224ENST00000479051 IRF2BPLQ9H1B7 796 aa21.31■■□□□ 1
VARS-224ENST00000479051 DDIT4Q9NX09 232 aa21.31■■□□□ 1
VARS-224ENST00000479051 DEC1Q9P2X7 70 aa21.31■■□□□ 1
VARS-224ENST00000479051 ACSL4O60488 711 aa21.3■■□□□ 1
VARS-224ENST00000479051 IGLV3-25P01717 112 aa21.3■■□□□ 1
VARS-224ENST00000479051 GYPCP04921 128 aa21.3■■□□□ 1
VARS-224ENST00000479051 C1QBPQ07021 282 aaKnown RBP21.3■■□□□ 1
VARS-224ENST00000479051 FZD5Q13467 585 aa21.3■■□□□ 1
VARS-224ENST00000479051 MPPE1Q53F39 396 aa21.3■■□□□ 1
VARS-224ENST00000479051 ACAD10Q6JQN1 1059 aa21.3■■□□□ 1
VARS-224ENST00000479051 SARM1Q6SZW1 724 aa21.3■■□□□ 1
VARS-224ENST00000479051 NAT16Q8N8M0 369 aa21.3■■□□□ 1
VARS-224ENST00000479051 SLC39A13Q96H72 371 aa21.3■■□□□ 1
VARS-224ENST00000479051 FCRL2Q96LA5 508 aaPredicted RBP21.3■■□□□ 1
VARS-224ENST00000479051 IRX2Q9BZI1 471 aaPredicted RBP21.3■■□□□ 1
VARS-224ENST00000479051 TRIM5Q9C035 493 aa21.3■■□□□ 1
VARS-224ENST00000479051 ARHGEF4Q9NR80 690 aa21.3■■□□□ 1
VARS-224ENST00000479051 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.3■■□□□ 1
VARS-224ENST00000479051 STOML2Q9UJZ1 356 aa21.3■■□□□ 1
VARS-224ENST00000479051 SYNJ2BP-COX16A0A087WUM0 186 aa21.29■■□□□ 1
VARS-224ENST00000479051 M0QYT0 321 aa21.29■■□□□ 1
VARS-224ENST00000479051 CACNG3O60359 315 aa21.29■■□□□ 1
VARS-224ENST00000479051 EGFP01133 1207 aa21.29■■□□□ 1
VARS-224ENST00000479051 SERPING1P05155 500 aa21.29■■□□□ 1
VARS-224ENST00000479051 CCR1P32246 355 aa21.29■■□□□ 1
VARS-224ENST00000479051 GRIA2P42262 883 aa21.29■■□□□ 1
VARS-224ENST00000479051 GSCP56915 257 aaPredicted RBP21.29■■□□□ 1
VARS-224ENST00000479051 PPP2R5DQ14738 602 aa21.29■■□□□ 1
VARS-224ENST00000479051 SND1Q7KZF4 910 aaKnown RBP eCLIP21.29■■□□□ 1
VARS-224ENST00000479051 ARCQ7LC44 396 aa21.29■■□□□ 1
VARS-224ENST00000479051 C1orf210Q8IVY1 113 aa21.29■■□□□ 1
VARS-224ENST00000479051 ETFBKMTQ8IXQ9 262 aa21.29■■□□□ 1
VARS-224ENST00000479051 ATP6V0D2Q8N8Y2 350 aa21.29■■□□□ 1
VARS-224ENST00000479051 DDI1Q8WTU0 396 aa21.29■■□□□ 1
VARS-224ENST00000479051 SYT11Q9BT88 431 aa21.29■■□□□ 1
VARS-224ENST00000479051 METTL5Q9NRN9 209 aaKnown RBP21.29■■□□□ 1
VARS-224ENST00000479051 RBM12Q9NTZ6 932 aaKnown RBP21.29■■□□□ 1
VARS-224ENST00000479051 DNAJC17Q9NVM6 304 aaKnown RBP21.29■■□□□ 1
VARS-224ENST00000479051 COX16Q9P0S2 106 aa21.29■■□□□ 1
VARS-224ENST00000479051 PAXBP1Q9Y5B6 917 aa21.29■■□□□ 1
VARS-224ENST00000479051 TYW5A2RUC4 315 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms