RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 RGSL1A5PLK6 1076 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PRRG1O14668 218 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PPEF2O14830 753 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 NDUFS2O75306 463 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 ANXA9O76027 345 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 KELP23276 732 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PTGS2P35354 604 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 RNASE9P60153 205 aaKnown RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 POU4F1Q01851 419 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 FOXR1Q6PIV2 292 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 C7orf61Q8IZ16 206 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 ZC3H10Q96K80 434 aaKnown RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 MUC3BQ9H195 1237 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 UNKLQ9H9P5 680 aaKnown RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 ZNF219Q9P2Y4 722 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 PI4KBQ9UBF8 816 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 SLC24A2Q9UI40 661 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 ANGPT4Q9Y264 503 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 FIS1Q9Y3D6 152 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PCDHGA3Q9Y5H0 932 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PLCH2O75038 1416 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 C17orf113A0A1B0GUU1 675 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 FSCN2O14926 492 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 AKAP10O43572 662 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 BUB1O43683 1085 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 TSPAN1O60635 241 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PPM1BO75688 479 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 HAUS5O94927 633 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 TGM6O95932 706 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CTPS1P17812 591 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 MUTP22033 750 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CDC25BP30305 580 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CSNK2BP67870 215 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 VAC14Q08AM6 782 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 TRIP13Q15645 432 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 VMACQ2NL98 169 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 LYPLAL1Q5VWZ2 237 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 TXNDC11Q6PKC3 985 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 COL23A1Q86Y22 540 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 GRAMD1CQ8IYS0 662 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 OR8H2Q8N162 312 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 HDAC7Q8WUI4 952 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PROX1Q92786 737 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 KLHL15Q96M94 604 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CASD1Q96PB1 797 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 SUGCTQ9HAC7 445 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PDE11AQ9HCR9 933 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 C19orf12Q9NSK7 152 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 TBCCD1Q9NVR7 557 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 DPP3Q9NY33 737 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 MTMR4Q9NYA4 1195 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 FBXL21Q9UKT6 434 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 VPS4AQ9UN37 437 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PCDHGB7Q9Y5F8 929 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 TNPO3Q9Y5L0 923 aaKnown RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 A0A087WZ62 844 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 LOC100653049A0A140TA62 436 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 MCIDASD6RGH6 385 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 LSM1O15116 133 aaKnown RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 SIAH2O43255 324 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 INMTO95050 263 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 KAT7O95251 611 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CYP2A6P11509 494 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 KITLGP21583 273 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CLCN1P35523 988 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PNPLA4P41247 253 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 POLR2HP52434 150 aaKnown RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 CAMK2DQ13557 499 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 SNAPC1Q16533 368 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PXKQ7Z7A4 578 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 MINDY1Q8N5J2 469 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 RDM1Q8NG50 284 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CCDC107Q8WV48 283 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 SNX21Q969T3 373 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 ZNF717Q9BY31 904 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 BRINP2Q9C0B6 783 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 LACRTQ9GZZ8 138 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CLPBQ9H078 707 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 PLGRKTQ9HBL7 147 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CA5BQ9Y2D0 317 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 FPGT-TNNI3KV9GXZ4 949 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 BTBD19C9JJ37 291 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 SSNA1O43805 119 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 CD40LGP29965 261 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 NTSP30990 170 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 MAGEA4P43358 317 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 ZNF135P52742 658 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 PER3P56645 1201 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 GAD2Q05329 585 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 MAD2L1BPQ15013 274 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 TTC39BQ5VTQ0 682 aaPredicted RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 TWF2Q6IBS0 349 aaKnown RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 DEPDC4Q8N2C3 294 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 MARVELD2Q8N4S9 558 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 LRRC17Q8N6Y2 441 aa5.56□□□□□ -1.52
USF3-202ENST00000478658 DRG1Q9Y295 367 aaKnown RBP5.56□□□□□ -1.52
USF3-202ENST00000478658 SH3PXD2BA1X283 911 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 ZNF862O60290 1169 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 MPZL2O60487 215 aa5.55□□□□□ -1.52
USF3-202ENST00000478658 PPP1R37O75864 691 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms