RNA–Protein interactions for RNA: ENST00000478251.1

GFM1-206, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-206ENST00000478251 CLIC5Q9NZA1 410 aa11.78□□□□□ -0.52
GFM1-206ENST00000478251 CWC15Q9P013 229 aaKnown RBP11.78□□□□□ -0.52
GFM1-206ENST00000478251 RWDD3Q9Y3V2 267 aa11.78□□□□□ -0.52
GFM1-206ENST00000478251 SHROOM3Q8TF72 1996 aa11.78□□□□□ -0.52
GFM1-206ENST00000478251 ZNF840PA6NDX5 716 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 H3BNC9 293 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 PER2O15055 1255 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 CST8O60676 142 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 ADH1AP07327 375 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 COPS2P61201 443 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 SCAPQ12770 1279 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 EFEMP1Q12805 493 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 SNX1Q13596 522 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 C12orf50Q8NA57 414 aaPredicted RBP11.77□□□□□ -0.52
GFM1-206ENST00000478251 NETO2Q8NC67 525 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 PSMG2Q969U7 264 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 SLC39A13Q96H72 371 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 FCRL2Q96LA5 508 aaPredicted RBP11.77□□□□□ -0.52
GFM1-206ENST00000478251 DCLK3Q9C098 648 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 TKTL2Q9H0I9 626 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 C10orf88Q9H8K7 445 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 STK39Q9UEW8 545 aa11.77□□□□□ -0.52
GFM1-206ENST00000478251 MYO18AQ92614 2054 aaKnown RBP11.77□□□□□ -0.53
GFM1-206ENST00000478251 HELZP42694 1942 aaKnown RBP11.77□□□□□ -0.53
GFM1-206ENST00000478251 C2orf78A6NCI8 922 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 KCNU1A8MYU2 1149 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 TTI1O43156 1089 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 PHF2O75151 1096 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 RFPL2O75678 378 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 MAP3K6O95382 1288 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 RB1P06400 928 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 C8AP07357 584 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 CSH1P0DML2 217 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 CSH2P0DML3 217 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 EPCAMP16422 314 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 KLRC2P26717 231 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 PTGIRP43119 386 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 ALDH1A3P47895 512 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 UBE3AQ05086 875 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 GPM6BQ13491 265 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 ANKRD20A8PQ5CZ79 823 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 BBS12Q6ZW61 710 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 GAREM2Q75VX8 874 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 B4GALNT4Q76KP1 1039 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 PRUNE1Q86TP1 453 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 MIB1Q86YT6 1006 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 TMC8Q8IU68 726 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 KREMEN2Q8NCW0 462 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 LRRN4Q8WUT4 740 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 NTAN1Q96AB6 310 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 TRMT2BQ96GJ1 504 aaKnown RBP11.77□□□□□ -0.53
GFM1-206ENST00000478251 CEP295NLQ96MC4 621 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 CSPG4P5Q96PW8 444 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 RNF157Q96PX1 679 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 SLC22A12Q96S37 553 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 TRIM51Q9BSJ1 452 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 RNF38Q9H0F5 515 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 LRRC19Q9H756 370 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 TLR8Q9NR97 1041 aaKnown RBP11.77□□□□□ -0.53
GFM1-206ENST00000478251 ARHGEF38Q9NXL2 777 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 RRN3Q9NYV6 651 aa11.77□□□□□ -0.53
GFM1-206ENST00000478251 ESYT3A0FGR9 886 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 BHMG1C9JSJ3 638 aaPredicted RBP11.76□□□□□ -0.53
GFM1-206ENST00000478251 CCDC188H7C350 402 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 RFXAPO00287 272 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 TLR5O60602 858 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 CLASP2O75122 1294 aaKnown RBP11.76□□□□□ -0.53
GFM1-206ENST00000478251 MYBL2P10244 700 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 VSNL1P62760 191 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 CREMQ03060 361 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 KRT81Q14533 505 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 SNX30Q5VWJ9 437 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 C8orf74Q6P047 294 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 TP53INP2Q8IXH6 220 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 GLIS1Q8NBF1 620 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 ACTL9Q8TC94 416 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 WBP2Q969T9 261 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 MAGOHBQ96A72 148 aaKnown RBP11.76□□□□□ -0.53
GFM1-206ENST00000478251 ZNF512Q96ME7 567 aaPredicted RBP11.76□□□□□ -0.53
GFM1-206ENST00000478251 NAP1L3Q99457 506 aaPredicted RBP11.76□□□□□ -0.53
GFM1-206ENST00000478251 ZNF670Q9BS34 389 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 PARD6BQ9BYG5 372 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 HCFC1R1Q9NWW0 138 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 COMMD8Q9NX08 183 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 DNPEPQ9ULA0 475 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 SSX2IPQ9Y2D8 614 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 NYNRINQ9P2P1 1898 aaKnown RBP11.76□□□□□ -0.53
GFM1-206ENST00000478251 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.76□□□□□ -0.53
GFM1-206ENST00000478251 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.76□□□□□ -0.53
GFM1-206ENST00000478251 COCHO43405 550 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 LPXNO60711 386 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 GLUD1P00367 558 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 IGLV3-27P01718 113 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 F11P03951 625 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 AMPD1P23109 780 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 ELF1P32519 619 aa11.76□□□□□ -0.53
GFM1-206ENST00000478251 COILP38432 576 aaPredicted RBP11.76□□□□□ -0.53
GFM1-206ENST00000478251 CCR2P41597 374 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms